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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19987_PI390587928Hv_44K_v2GCCTGTTTCTGCTGTCAAGTTACAGGATGTCGATAAGATAAATTTCCTTAGAATTAATTC692GeneList: greenyellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 4.1593.6771.3570.5190.2810.196
Raw 132.258190.34559.39536.9415.6972.868



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_73427.315222e-241386 - 144510060 / 60plus None
MLOCMLOC_73427.121452e-242066 - 212510060 / 60plus None
MLOCMLOC_73427.222382e-242159 - 221810060 / 60plus None
JLOC1JLOC1_48885.122618e-252091 - 215010060 / 60plus
Harvest35U35_88357853e-25693 - 75210060 / 60plus



Contig Sequence (785 bp)

>U35_8835 785 Hv_44K_v2
CCGGGGCTGCAGGACCTGCTGCTCTCGACCAACCCGCTGCTGGGAGGCACCCTGATGCAG
CGCGGCTGGGAGAAGATGGCGAGCCTGGCCACGCTGGACCTGTCCAACGTCGGCCTCGCC
GGCACCATCCCGGAGTCCATGGCGGCGATGCCCAGGCTGCGGTTCCTGGCGCTGGACCAC
AACCGGCTCTCCGGCGCCGTGCCGGCCAAGCTCGCCGCGCTGCCGAGCATCGGCGCCATG
TACCTCAACGGCAACAACCTGACGGGGGCACTCGAGTTCTCGGCCCGGTTCTACCAGAGG
ATGGGCAGCAGGTTCGCGTCCTGGGACAACCCCGGCCTGTGCACGGCGGAGACGGCCGGC
GGCGCGCCGACCGGCGTGGCGGTGTGCAAGGACGCGCAGGATCCGCCTAGCGTCGGCGCG
AGGGACGGGATGGATGGGGGTGGGAGGAAGCCCGAGGCGGCGTCCTCCTCATCGGCTGGC
ATGGTCACCGTGCTCTGGTGGTCGGTGCTGGTTCAGTGGATGATGATGCTGCTGTAGACA
CCAAGTTCAGATTTACTGATATGATAGGTAGAAAGATGGTGTTTTGTTGTGTTCGGTTCT
GTTGTGTCGATTGGTGAAGAAAGAACAGAAGAGAGGCTGGAGGAGTCTAGTGGTTGGTTA
CTGACAGAGATGTTCATTTTGGGTGTAATTAGGCCTGTTTCTGCTGTCAAGTTACAGGAT
GTCGATAAGATAAATTTCCTTAGAATTAATTCTGCTTCATCTTGTGGGAAAAAAAAAAAA
AAAAA



Homology of Contig U35_8835 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g02060.24513e-59protein|TOO MANY MOUTHS precursor, putative, expressed
Brachypodium v1_2Bradi2g00920.15081e-69
Arabidopsis v10None