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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19947_PI390587928Hv_44K_v2CTTCTGCGTCATTGTTGCTTAACCACTCTATTGAAGAGTCGCCACTCTGCATTTGCTTCT571GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37199337702e-24236 - 29510060 / 60plus ABC09287
MLOCMLOC_55791.144162e-241361 - 142010060 / 60plus ABC09287
MLOCMLOC_55791.251942e-241326 - 138510060 / 60plus ABC09287
MLOCMLOC_55791.351912e-241326 - 138510060 / 60plus ABC09287
JLOC1JLOC1_36027.250958e-251354 - 141310060 / 60plus
JLOC1JLOC1_36027.150988e-251354 - 141310060 / 60plus
Harvest21ABC283296493e-25572 - 63110060 / 60plus
Harvest35U35_291366493e-25572 - 63110060 / 60plus



Contig Sequence (649 bp)

>U35_29136 649 Hv_44K_v2
GCAAANAGTTGCCGATGCGGCACCTGCGGTGCTTGATGAGGTGGTAGATTTGCCACTTCA
CACGGGTGTTGGGAGTTCTGGTTATGTGGCATCTGTGAGGAGCGCTACCCAGATGTGGCG
CATTCATTGCGGGAGCATGTGAGTGCAATACCACGTCAAGTGCAGGCTATGTTGCCACAG
GAGATTGATGCTGACTGGGCAGCAATGCTCCTTGGCTCGAGCTGGAGGCCAGTGGATGTT
GCTGCGGCGCTCAAAGCGCTTGAGGAAGAGCAAGGGGACAATATCGGCCAAGACAGGGAC
AAAGATTCAATGTCATCTGATAATTGGAGTATCAAGGACAAGTCGGACACCTCAGAATCC
TCAGCCTCGCCACACAATGAGGAGTGTGATGGTTTTGGAGTGGTAATGAGGGAAGGTGCC
CGAAAATGGCCGCTGTCTGATGATGATGAAAGAGCGAAGATTTTGGAGAGGATCCATTCA
TTGTTCCAAACCCTTGTGAAGCATAAAAACATTTCAGTGAACCATCTGAACAGGGTGATA
CAATATGCCATGGACGAACTTAGAGGGATGCCTTCTGCGTCATTGTTGCTTAACCACTCT
ATTGAAGAGTCGCCACTCTGCATTTGCTTCTTGGAGGCCTCATCACTGA



Homology of Contig U35_29136 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g06950.115807e-85protein|ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed
Brachypodium v1_2Bradi1g74000.214145e-107
Arabidopsis v10None