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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19717_PI390587928Hv_44K_v2TCTCAAGCTGAGCATGAATCCGCGATATCTGCCTAGTTAGAGTCATCAGCTTCTGTGAAA618GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5791.7631.1730.7980.2890.367
Raw 507.749933.195513.240578.69869.48197.239



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_48924.15012e-24250 - 30910060 / 60minus None
MLOCMLOC_48925.112552e-24263 - 32210060 / 60minus None
JLOC1JLOC1_31367.212068e-25886 - 94510060 / 60plus
JLOC1JLOC1_31367.14358e-25115 - 17410060 / 60plus
Harvest21ABC241957173e-25619 - 67810060 / 60plus
Harvest35U35_267897173e-25619 - 67810060 / 60plus



Contig Sequence (717 bp)

>U35_26789 717 Hv_44K_v2
GGCACAAAGCTCCACAGATCTGTAATACAGATGTCCCCAACATTATCTGAAGAGCCAGTC
GGACATGAGAATGAGAAGATAGCTACAACAGATGATATGGTTCCCTTTTATCAACTACCC
CCTGATGGTTATAATCAATACAAGCAGTCAGGTTTGGATACTCTCCAGAGAACACCATGC
AGATCAAGGTATATGGGTGTGGAAGTGAGTCAGACGGAAGAACCTTCTGATGCCAAATTG
GATAAAACAACCACAAGCAGCGTCGTGAAGAGAGGGTCACATTTAAGAAGATCCATTCAG
AGCAGCATAGGGAAGTTGATTCATGGCTCGGAAAGAAGGAATATTCCACATTCAGCCCAA
CCAACTCCTGTCAAACTCACAACTAATGCAAACAATGACGGCGCATCTCCAATTACTACC
AACACGAGGTTAAAAAGAAGACAGTCACTAACAGGTCTCCCACCTCCCTCGTCGACCATG
TCACGCAGATCATCTCTAGGAGGAAAGTCGGATTCGAGTTCAACTGACAAAAAAGCCAAA
ACGCCACCTCCGATGAATTCAGCTGCAAAGGCAAAGAGATGGCTGTGAATCCTCAGCGAA
AATCGTCAGAGATTTCCATCTCAAGCTGAGCATGAATCCGCGATATCTGCCTAGTTAGAG
TCATCAGCTTCTGTGAAACCTTGATATTGCTGAAGAAGGAACACCAGCGAGGGTTCG



Homology of Contig U35_26789 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g14090.14461e-60protein|kinesin motor domain containing protein, putative, expressed
Brachypodium v1_2Bradi2g08517.24562e-76
Arabidopsis v10None