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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19558_PI390587928Hv_44K_v2GATGTAACTAGACTAACAGATTGGAATGGTTTGTACATGCCACTTGTCATTTCAGAACAA487GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_72183.515912e-24611 - 67010060 / 60plus ABC05260
MLOCMLOC_72183.320002e-24901 - 96010060 / 60plus ABC05260
MLOCMLOC_72183.429982e-241340 - 139910060 / 60plus ABC05260
MLOCMLOC_72183.123162e-24737 - 79610060 / 60plus ABC05260
JLOC1JLOC1_48016.423988e-25742 - 80110060 / 60plus
JLOC1JLOC1_48016.228378e-251181 - 124010060 / 60plus
JLOC1JLOC1_48016.124008e-25744 - 80310060 / 60plus
Harvest21ABC052615613e-2515 - 7410060 / 60minus
Harvest21ABC0526028513e-252780 - 283910060 / 60plusABC05260
Harvest35U35_165265613e-25488 - 54710060 / 60plus
Harvest35U35_1652528513e-252780 - 283910060 / 60plus



Contig Sequence (561 bp)

>U35_16526 561 Hv_44K_v2
GGCCCCTTAGGCTGGATCGTTGCGATATGGGCTGAGAAAGTCCCTTTGAACCTGAACAGG
ATAATGCCTGCGAAGGGAGTGTGCATTTCTATTTTCATGTTTCCCAGGATACATTCAACC
CTCGACATTCTGGGAATCGAGGGACCAAGTTTTCCTGAATGTGTGGAGCGCACCCACTGG
ATATGCATGTTTCCTTCTCTGACGCAACATGGTAATGTACACGATTTCTTGAACCAGCAT
ACATATTGGCATTTCTCCAAGAGGAGAGAATATTTACAGTCATAGTGTTATCATGGAACA
CATAAAATTTAGTCATCATGGAACACATAAAATTTAGTCATACGTGTGGCTAGTTTAGTC
CAACTTCATAAGCCCATCACATTTTTTTTGGAGGAATCCCATTACATCTTGCAAAGCATT
CACAATGCCCGGTGTAATTTTACCTTTTTACCCCTATCCATGTACATATTTCTGTAGCAT
AGTAGAAGATGTAACTAGACTAACAGATTGGAATGGTTTGTACATGCCACTTGTCATTTC
AGAACAAAAAAAAAAAAAAAA



Homology of Contig U35_16526 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None