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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19556_PI390587928Hv_44K_v2AAACACCACCCTGTACTGACCCAGTTTTGCAGGAAACTCACCGGCATCCGGCAGGAGGAT292GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35484742082e-24358 - 41710060 / 60plus ABC02438 ABC02441 ABC02443 ABC02445 ABC02447 ABC06963 ABC10558
MLOCMLOC_49358.111306e-24722 - 78010059 / 59plus ABC02438 ABC02441 ABC02445
MLOCMLOC_49358.25916e-24298 - 35610059 / 59plus ABC02438 ABC02441 ABC02445
JLOC1JLOC1_31601.112883e-24879 - 93710059 / 59plus
Harvest21ABC236044073e-25293 - 35210060 / 60plus
Harvest35U35_6814093e-25293 - 35210060 / 60plus



Contig Sequence (409 bp)

>U35_681 409 Hv_44K_v2
TTTCGATCCCAAATTCCCCGATCTCTGCTGCCCTAGTTTTCGATCCCAAATTTCCCCGAT
CTCGACTCTCGATCTGTAGTTCGCGCGCACTCCGGCGAACATGGCAGCGATCATGGCGGC
GCGCGGGCAGGGTCTGGAGCAAGATTTCGATTTCTTCGTGGTGGTCGACTTTGAGGCGAC
GTGCGTGAAAGACGCGCGGATCTACCCGCAGGAAATCATTGAGTTCCCCGCCGTGCTCGT
CGACGGCGCCAGCGGCCGCATCGAGTCCTCGTTTCGCAGGTACGTTCGTCCTAAACACCA
CCCTGTACTGACCCAGTTTTGCAGGAAACTCACCGGCATCCGGCAGGAGGATGTCGACGG
CGGCGTGGATCTTCGCGAGGCACTCTGGCTGCACGACGCTTGGCTGAAG



Homology of Contig U35_681 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None