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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19554_PI390587928Hv_44K_v2CCAATGGGGCTATTCTCGATGTATTCAGTGTCTGAATTAGTATTACAGTTCTACTAAAAA629GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37346413773e-221286 - 134110056 / 56plus ABC02438 ABC02441 ABC02443 ABC02445 ABC02446 ABC02447
MLOCMLOC_64973.130193e-22106 - 16110056 / 56plus ABC02447
MLOCMLOC_64974.19733e-22106 - 16110056 / 56plus ABC02447
MLOCMLOC_64974.220993e-22105 - 16010056 / 56plus ABC02447
MLOCMLOC_64973.241263e-22105 - 16010056 / 56plus ABC02447
JLOC1JLOC1_42710.312541e-22106 - 16110056 / 56plus
JLOC1JLOC1_42710.232811e-22106 - 16110056 / 56plus
JLOC1JLOC1_42710.118751e-22106 - 16110056 / 56plus
Harvest21ABC024477013e-2513 - 7210060 / 60minusABC02447
Harvest35U35_6827013e-25630 - 68910060 / 60plus



Contig Sequence (701 bp)

>U35_682 701 Hv_44K_v2
GCCTGCATTGCGGGTTGGACGATGCCCTCAACACGGCACGACTGCTTGCTGAGATCATGC
GGCGCGGGGTCAAGATGACCATCACTGGCTCGCTGGCGCCGCTGCTGCCGTTCGAGCAGG
AGCAGCAGCCTCGCACAAGCACCTGCGGTGGCTCACCTGCGCTGGCGCCGCCGCCGCTGC
CGTTCGAGCAGAAGCAGCAGCCTCGCACAAGCACCTGCGGTGGCTCACTTGCGCTGGCGC
CGCCGATCCAGCAGCAGCCGCCTCGCACAGGCCCTTGTGATGGCTCGTTTCCGCTGGTGC
CGGCGCCTATCCAGCAGAAGCAGCAGCAGCGGCCGCAGCCTCACATAATCAGCCCCTGTG
GTGGCTCCTCTGCGACGTGGTACTGCGGGGTGACGACAAAAGGAGGCATGGAGCCAGGGG
CGATGCAGTCTGGATGTACCAACTGGACGCCGGCCATGGGAGCCGTGTCCCCCTACTACA
TGTGGAGCAACTGAACCATGAGACTGAGATTTAGAATTCAGTGTCGCTCGGCTGCTAGTG
TTAATCGTCCTAACCATCAGAATCAGAGTGTAGATCAGCTGATTCTTGCCTAGTCTAGGT
GTGAATTTGGTCTTTGAAATCCAACTTGACCAATGGGGCTATTCTCGATGTATTCAGTGT
CTGAATTAGTATTACAGTTCTACTAAAAAAAAAAAAAAAAA



Homology of Contig U35_682 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None