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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19441_PI390587928Hv_44K_v2TCACTTTCTGGAGGTGCCCAGTTTCAGCAAAGTACGAGCATGAATGCTGATTCATTCATG424GeneList: ivory
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9850.9011.3741.0860.9280.883
Raw 64.74983.211121.986136.23045.82447.382



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36261333562e-24434 - 49310060 / 60plus ABC07972 ABC08350 ABC19912
MLOCAK251630.116752e-24485 - 54410060 / 60plus None
MLOCAK36354232782e-24485 - 54410060 / 60plus ABC07972 ABC08350 ABC19912
MLOCMLOC_75369.128562e-241122 - 118110060 / 60plus ABC08350
MLOCMLOC_69970.113292e-24257 - 31610060 / 60plus None
MLOCMLOC_69970.213272e-24257 - 31610060 / 60plus None
MLOCMLOC_69970.318352e-24257 - 31610060 / 60plus None
JLOC1JLOC1_46396.220088e-25248 - 30710060 / 60plus
JLOC1JLOC1_46396.120318e-25271 - 33010060 / 60plus
Harvest21ABC221144873e-25425 - 48410060 / 60plus
Harvest35U35_101884883e-25425 - 48410060 / 60plus



Contig Sequence (488 bp)

>U35_10188 488 Hv_44K_v2
CCCGCACACACGCAGCCACCAGAAGCGGAGGAGAAGAAATAAGAACTACGCAGCGTAGAA
ATAAAAAGGGGAAGACAACTCCAGAAAGAATAATATCCGGAGCACGAGACCAAGGAGGAG
GACGAGCGGCAGAATCACGGAGGAGGTGGAAGAACAGCGACCGACCATGACCGCTCGCGA
GCTCTCGAGTTTCCAGCGAAAATATCCAAAGATCCTTGCTTGTTTCCAGTGACGTTCTAT
CCCGTTAAGCAAGATTCTTCAAGGTGATGGTTCAGTCTCAACCCTGCTGACCTCCATGTC
CGGGGCCCCATGCTCCAACCTTGGATTTGTTTCCAGGGACATGAATGGTAGCCTTCCAGT
TAGTACTACAAATTCCTCTGGGCTAAGCATTGGTGTTAGCTCTTTGGTGACCGATGGCAA
CTCATCACTTTCTGGAGGTGCCCAGTTTCAGCAAAGTACGAGCATGAATGCTGATTCATT
CATGCGCC



Homology of Contig U35_10188 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None