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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19432_PI390587928Hv_44K_v2TAAAGTTTGTCATGTGACGGCAAGTGTGGAACTTGGTTGTTGCGTTTCTTTCCGTCCAAA881GeneList: grey60
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.5372.3711.0960.8080.3490.588
Raw 364.272541.386219.893263.95438.28870.860



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_221659553e-25882 - 94110060 / 60plus



Contig Sequence (955 bp)

>U35_22165 955 Hv_44K_v2
GCCCTCCTCTCCCGGCGGTTTCTTCGCCCAAAAATCAAACCCAGCGGGAGGGAAAACCAA
GAAAGGGCGTGCGAAAATGGCGGACGCGAACTCGTACGAGGAGCAGCGCACGAGGCAGGT
GGAGGAGAACAAGCGGAAGCTGGAGGAGCTGCGCCTGCACCACCTCTCCGCCGCCGTCCG
CGAGGCCGCCGCCAAGCCCAAGCTGAAGAGGAAGGCGTCGAAGCCACGGGACGCCGCCGA
TGACGCCCCGCCCCGGCGCTCCGGCCGTATCGCCACCCTCCCCGAGCAGCCCGACTATCG
CGACAATGTAAAGCTCGGCACCGGGAAACCACGGCAGCAAAAAGAAGTAAAGCCTGATCA
TGCGTATGCCATCGCCAAGGCCGAAGAGCTACGGGATGAGCTTGGCTCCGACTACCCCAC
CTTTGTCAAAACCATGCCCCAATCTCTTACCTCGCTGTATATTCCGGCACAGTTCAGCAT
GGAGCATCTCCCGGACCGTGGCATGAAATTGGTTTTGGTGGATGAGGAGGAGGAGGAGTT
TAAGGTGCAATATCGTCCACACAGTAGCAGTCTTGTCACCGGGTGGAGCGAGTTTGTCAT
GGACAATGAGCTGGTGGAAGGTGATTGCTTGGTGTTCCAGCTGATCAGGAGGGCATTGTT
CAAGGTCTTCATTTTCAGGGCAAGTTCGTACTATGAAAATGACCATTAATGAAGCAGCCG
GCAGGCTCCTGGTTGCGTCATGTCAATTTCTATTGAGGTTTGATGGTTCAAAAATCTGCA
CTATGTCAGGGGTCGGTTAGTTATGTATGTAAGGCAACTGTCAGGCATTCTTAGAACCAC
TCGTGCGGCTGGCAAGTCGTATGGTAACTGCCGGCATCGTGTAAAGTTTGTCATGTGACG
GCAAGTGTGGAACTTGGTTGTTGCGTTTCTTTCCGTCCAAAAAAAAAAAAAAAAA



Homology of Contig U35_22165 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g60530.12808e-66
Arabidopsis v10None