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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19386_PI390587928Hv_44K_v2GTATAAATATATGATCAAATTCTGGACCAGTTCAGGTCTGACGTGCGGCATAATACTACT3GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_53292.1212463e-211028 - 10879759 / 61plus None
MLOCMLOC_53292.1311223e-21904 - 9639759 / 61plus None
MLOCMLOC_53292.721283e-211888 - 19479759 / 61plus None
MLOCMLOC_53292.822583e-212018 - 20779759 / 61plus None
MLOCMLOC_53292.1119803e-211699 - 17589759 / 61plus None
MLOCMLOC_53292.1018233e-211542 - 16019759 / 61plus None
MLOCMLOC_53292.122733e-211992 - 20519759 / 61plus None
JLOC1JLOC1_34223.321522e-211887 - 19469759 / 61plus
JLOC1JLOC1_34223.222812e-212016 - 20759759 / 61plus
JLOC1JLOC1_34223.121572e-211892 - 19519759 / 61plus
Harvest21ABC506405833e-254 - 6310060 / 60minus
Harvest35U35_486675833e-254 - 6310060 / 60minus



Contig Sequence (583 bp)

>U35_48667 583 Hv_44K_v2
TGCAGTAGTATTATGCCGCACGTCAGACCTGAACTGGTCCAGAATTTGATCATATATTTA
TACTTACAGAAATATGCTGCAAAAAAATTGCATTGCCAGCATATGTCCAAGACAAAGCGG
GTTTAGTGTTGACTTCCGGTTCTACTTGGGCGAGATTCCCAGTTCGTGACATGGAAAGCC
GGCAATCTTCATCCAAAACGATGTATAAATATGAACTAAATGAACCACAGTACCACTATG
ATTGATCTCCTAGTTAAAAACACTGTCCACCTCTGGCGACCTGCAAAATTCCTCAGCGTC
CTTGTTACTTGTAGCCGACTTCTTTCATCAAGTGTCGATAGCTTCGCCCACGAACTACAC
GTTGCCATGAGAATGATATTGATTCTTGAACGGTCAACTCTAATCTCTGCTGAACAAGCC
ATCTAGCAAGACAACGCTGAACCCCACGTGTGATTGGTCGCACAAAGGATGGATCTCTCT
GTTGATAAAGTAAGCCAACCTCCATCATGGCGACTGCTGCAGGATCGTCCAATATTTCCA
GGCTATCATCTGCTAGGTAATTCAACCCAAATTCTGTGTTTAC



Homology of Contig U35_48667 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi4g27460.15633e-51
Arabidopsis v10None