- Probe CUST_19379_PI390587928
- Source Contig U35_36697
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_19379_PI390587928 | Hv_44K_v2 | CTGATAATATTTCTGTGTGAAAGGAGATCGATTGATTGAAATCTTCCGTAATGATCGTTG | 25 | GeneList: mediumpurple3 MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 5.210 | 4.702 | 1.901 | 0.146 | 0.020 | 0.015 |
| Raw | 2323.448 | 3136.921 | 1083.821 | 117.808 | 4.843 | 2.828 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC31925 | 379 | 3e-25 | 26 - 85 | 100 | 60 / 60 | minus | ABC31925 |
| Harvest35 | U35_36697 | 379 | 3e-25 | 26 - 85 | 100 | 60 / 60 | minus |
Contig Sequence (379 bp)
>U35_36697 379 Hv_44K_v2 TTTTTTTTTTTTTTTTTAAAAAAAACAACGATCATTACGGAAGATTTCAATCAATCGATC TCCTTTCACACAGAAATATTATCAGTCCTTTTACAGAAACTCTTTCATAAATCAACGGCC GGAAATGCATCAAAATCGTGCTGGCCGGCTTTTAGTCCGGCTGTCTTTTTAAAAATACTA AGGGGGTATTATTATTTGGGCCTCATCTAGCTAAGTCAACACACATCCCTTTGTATAGTC TGGGCTGAAAAACCGGCAGGGCGTTTATGGACGGCATTTCGCGTGGCAATGGTGCACCGA CCCAAAGCAAGTCCCACTGAAGTCACAGCACCAGCAGTTATTGCCTCGATAGCCACCTCC GCAGAAGCTGGGCTTACAC
Homology of Contig U35_36697 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |