- Probe CUST_19245_PI390587928
- Source Contig U35_48176
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_19245_PI390587928 | Hv_44K_v2 | TGATGTTTTTTTCTTTTCTGAATGCTGTTAATGTAGCTGGCTTCTTTGCTCCAAAAAAAA | 9 | GeneList: saddlebrown MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.026 | 0.068 | 0.707 | 1.754 | 1.516 | 1.717 |
| Raw | 6.814 | 30.503 | 286.659 | 1096.996 | 338.244 | 409.596 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_48176 | 221 | 3e-25 | 10 - 69 | 100 | 60 / 60 | minus |
Contig Sequence (221 bp)
>U35_48176 221 Hv_44K_v2 TTTTTTTTTTTTTTTTTGGAGCAAAGAAGCCAGCTACATTAACAGCATTCAGAAAAGAAA AAAACATCATCATCTTTACAACCCATCACTCGGGGTGCGACCGCAGCGGCGCCGCCGGCA GCCGCCGCACGGCCATCGGCTCGGGCTGCCGCTGCTGCCTTCCCGCGCCGCTCCCGCCGC CGCCGCGCATCCTGACGAACGCCTTCCCCTGCCCGGCGCCC
Homology of Contig U35_48176 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |