- Probe CUST_19220_PI390587928
- Source Contig U35_7100
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_19220_PI390587928 | Hv_44K_v2 | ATCAGTATGTTTCTCAGTTTGTGCACTTTAGATATTTGTATTCGCATAAAGATGTGAGGC | 1199 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_15156.5 | 1402 | 2e-24 | 1271 - 1330 | 100 | 60 / 60 | plus | ABC14852 ABC14853 |
| MLOC | MLOC_15156.6 | 2203 | 2e-24 | 2072 - 2131 | 100 | 60 / 60 | plus | ABC14852 ABC14853 |
| JLOC1 | JLOC1_10376.13 | 1394 | 8e-25 | 1223 - 1282 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.12 | 1378 | 8e-25 | 1207 - 1266 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.11 | 1385 | 8e-25 | 1214 - 1273 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.10 | 2186 | 8e-25 | 2015 - 2074 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.9 | 1385 | 8e-25 | 1214 - 1273 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.8 | 2190 | 8e-25 | 2019 - 2078 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.7 | 2222 | 8e-25 | 2051 - 2110 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.6 | 1425 | 8e-25 | 1254 - 1313 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.5 | 1401 | 8e-25 | 1230 - 1289 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.4 | 1368 | 8e-25 | 1197 - 1256 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.3 | 1441 | 8e-25 | 1270 - 1329 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.2 | 2246 | 8e-25 | 2075 - 2134 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_10376.1 | 1428 | 8e-25 | 1257 - 1316 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC14853 | 592 | 3e-25 | 38 - 97 | 100 | 60 / 60 | minus | ABC14853 |
| Harvest35 | U35_7100 | 1296 | 3e-25 | 1200 - 1259 | 100 | 60 / 60 | plus |
Contig Sequence (1296 bp)
>U35_7100 1296 Hv_44K_v2 CCCGTCTGCCACCTCCGCTACACACCCGAAGGGTGAGAAGGCAAGGAGGAAGGGGAAGAT GCTGGCGAGGCCCGGGCTCCGGTCCCGGTCTGTCGTCTACCCCTATCCAACCCCGACCCA ATCCAATGAAGTAGATTCCCCATCAAGCAGCTGCCAGCGACCCCAATCCACCGCCGGCCA GCGACCCCAACCCCGGCCATGACTCCATCGTCGCGCCACCTCCCCTCCATGACTGGAGAT CCACTCGAGCTCCTCCTCTCCAATCCCTTCGCTGACGACGACACCCAACCCCACACCCAC CGACGACTGTCTCCCCCAACCCCATCACCACCGAAGACCTTAGGTTTGACTCGCAGGCGG GCGGGGTGACAGCGCCCAAAACCGTAGCTCCTCACCTACTCACCCATGGATGGATGGATG GATGGGGACGGGGCAATGACGCGGTGGATCCACAGCCGCAACCACCTTCTCTCGATGGGG ACCTCGACACCGACGAACACCACTTCTACCTCGGACTCCATGATGTAATCTCTAGCGAGA CTTCATCTCCGACCGTGGACAAGGAAGCCCTCGTCCCCATGGTTGTTGCTGCTTCAAGTG GACAAGGAAACCCTGACGGTGACGGACGTGGTGTGTGTTGATTAAAGGGTCTGCGTGATG GAGGTTGGCAACATAGACGATTCAACGATGAAGGTGGAGACAGAGGCGAGCCATTCATAG GGCCGGTCTTCGGTTCCCTGACCCTGACCCCGGGCGGCGTCGCCTCCTCGGCGAGGTAGT TGGGCCTCAAGAACAGCATCGAGACCAACTTCGACGACGACCATGTCTTTCAGATAGCTT CTTGCCAGGAGATCTCAACGCTCGATGTGTCTCCGTCGACGAACGCACTGAAGTTCTATT CTCCAGCAACTAGACATTATCTGGGGGACTGCACAAGCCATACAGGGTCCATCCATGAAA TTGCCTTTTCAGCTCTGTCGTTGCCGCAAGTGACATGCTCTAGCTCTGGTGATGGCACCA TCAGAGCCTGGGCCAGAAGAATCTTTAAGCAAGTTCTTTGTCCTACTAGGTCTTGATTGT TGAATAAATATGTTGGTTGAACATAAATATTATGTGAATGTGCGTGACTGCAAAATTTCG TTAGTACCATAGTCTCATCTACACATTTCCTTCTTTAGTATATATATATATTAGAGTTCA TCAGTATGTTTCTCAGTTTGTGCACTTTAGATATTTGTATTCGCATAAAGATGTGAGGCN TATCTTGTTAATTCTTGTGAAAAAAAAAAAAAAAAA
Homology of Contig U35_7100 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |