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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19217_PI390587928Hv_44K_v2AAACTCAAGGTTGATGACAAGAAATCTGGAGAGGATGAACGTAAGAGTCAGAGTGACGAG676GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5621.6751.6170.9570.3320.340
Raw 4882.7638420.4476863.3206270.303782.246878.916



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_70693.116302e-24906 - 96510060 / 60minus ABC09730 ABC21940 ABC29542
MLOCMLOC_70693.319102e-241011 - 107010060 / 60minus ABC09730 ABC21940 ABC29542
MLOCMLOC_70693.416332e-24868 - 92710060 / 60minus ABC09730 ABC21940 ABC29542
MLOCMLOC_70693.217462e-241011 - 107010060 / 60minus ABC09730 ABC21940 ABC29542
JLOC1JLOC1_46928.116688e-25692 - 75110060 / 60plus
Harvest21ABC219407193e-25658 - 71710060 / 60plusABC21940
Harvest35U35_71037383e-25677 - 73610060 / 60plus



Contig Sequence (738 bp)

>U35_7103 738 Hv_44K_v2
CTCTTTGATGCTCTTCGTCCCGCGCCAAGTCTCCCTCGCCTCCCTCCCATCCACCGCCGC
CGCCGCCATGGCCAAGGAGGAGGTCAAGAAGGAGAAGAAGAGCAAGAGCAAGGGCGCCGC
CGCCAAGGCCTCCCCCGCCCCCGACGCGCGGGTCCTGGCCGCCGTCGCCGCCTTCCTCGA
GTCCAGCGGCCTCCCCCTCACGCTCGCCGCCCTCCGGTCCGAGGCCAGCCTCGAGGGAGA
CGCGTGGAGGTCGTCGCCGGTGAGCCTGGCGGACGCGGTCTCCAAGTTGCTGGAATCAAG
CGCTTCTGCTCCAGGAGCCAACATTACCGCGAGCGATGAGCAAGTGAAAGCGGATGATGC
CGTAGCGGAAGAGAAAGGCGCGGGCAAGAAAAAGAAGAACAAGAAAGGCGGTCTCGAAGC
TCACGAGACCGAGAGTAAGGCAATTGAGCCCTCTGCCCCTGAAGAGCCCAGCGAGAAGGC
GGATGATGAGACCAAGGAAAAGAAACGGAAGAAGAAGAAGGATAGCTCATCAGCCGGGGA
TGATGCCGAGGCAAATGCAGTAGTGAAGACTGATGGCAAGAAGAAGAAAAGCAAGAAACA
GGAAAATGATGAGGATGTTGAAGCCAGGCTGGAAAAGGTGGAATTAGCAGTAAAAGCCAA
GTTTGAGGCGGCAGGGAAACTCAAGGTTGATGACAAGAAATCTGGAGAGGATGAACGTAA
GAGTCAGAGTGACGAGGC



Homology of Contig U35_7103 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None