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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19204_PI390587928Hv_44K_v2GTAAATGGTAATAGTTCGAGAATGCCATCGAGTATTTAGTGGGGCATTCAAGGTAGCCAA843GeneList: mediumpurple3
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 3.1822.8091.1190.8070.3980.469
Raw 238.020321.866114.553126.43022.05529.081



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_71169463e-25844 - 90310060 / 60plus



Contig Sequence (946 bp)

>U35_7116 946 Hv_44K_v2
GCTTAGACTCAGAGTTCTTAGTTTCAACATCCACTGATGGTACTGCAAGAATTTGGAAGA
TAGATGAGGGGGCACCATTGATCAATTTGACTCGATCTTCGGACGAGAAGATTGAGTGTT
GCCGCTTTTCTAGGGATGGCATGAAACCGTTCCTGTTTTGCACAGTTGCAAAAGGTAGCA
AAGTTGTGACTGTTGTTTGGAACATAAGTGATTGGTCTAGGATTGGTTACAAAAGACTAC
TGGGAAAACCTGTCTCCACACTTTCAGTTAGCTTGGATGGGAAGTTTCTGGCTTTAGGAA
GCCACGATGGTGATTTTTGTGTTGTGGATGTAAAGGAGATGGAGATTTCTCACTGGAGCA
AGAAGGTTCATCTTGGTTCCCCTATATACGGAATTGAATTTTGTCCTACTGAAAGAGTGG
TAATCTCCACATCGCCGCAGTGGGGAGCAGAGCTGACAAAACTAAATGTGCCCGCTGACT
GGAAAGAATGGCAAATCTGGTTCATACTCTTGGCGCTCTTCCTTGCATCGGCTGTCCTGT
TCTACATATTCCACCAGAACTCCGGTTCCTTCTGGACGGGAATGCCCCGGCAAGACGTCA
TCGACCTACCAAGCCATGCAGAGTTCTGAACGAGCATCCTCCGTCTACTGAAAACCGGAA
CTCCTAGTGAAACTGTCCACCAGTGTGATTCTCTTTCAGGCAATCCAGTCCTGCAGTGTG
TTATTTATTTCATCACGAGAGTTTTTTTCTTTCTTTACGAGTGTAGTCGATGTTGTACCA
ATCCAGTTGCACGCCTATCTGGCCACGTCAGTATTTATCGGGGAAACACAGTAAAATATC
ACTGTAAATGGTAATAGTTCGAGAATGCCATCGAGTATTTAGTGGGGCATTCAAGGTAGC
CAAGCGGCCGCTCGAGCATTTTCGAAAGGGCCCAATTCGCCCTATA



Homology of Contig U35_7116 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g09000.13883e-112protein|WD domain, G-beta repeat domain containing protein, expressed
Brachypodium v1_2Bradi1g55000.13943e-116
Arabidopsis v10AT3G52190.13985e-70| Symbols: PHF1 | phosphate transporter traffic facilitator1 | chr3:19354117-19356910 REVERSE LENGTH=398