barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19121_PI390587928Hv_44K_v2GTTGTCCCAGACCATTGGATTTTGTAGCCAAATACTTGATTAATGCACTGTTCATATATT432GeneList: green
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1161.1341.3771.0990.3080.305
Raw 198.863310.006339.964419.86442.97744.727



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_340115343e-25433 - 49210060 / 60plus



Contig Sequence (534 bp)

>U35_34011 534 Hv_44K_v2
TCACTTCTTAGTGCATACCTTGTTCATGGCAATGATAGATTGGCTGAGATTGCTGGCCAG
GAGATTATAAAGAGAGAACCAGGGGATGATGGGGTTTATGTGCTTCTTTGGAACATATAT
GCCTCATCAGATAGGTGGAAAGAAGCCCTGGATATAAGAAAACAAATGTTGACAAGGAAG
ATATTCAAAAAACCAGGGTGTAGTTGGATTGAAGTCGATGGTGGTGTCCATGAGTTCTTG
GCACAGGACAAGGCACATGATGCTCGAAGGGAAATTTATGAGGCCTTGGAAGGAATCGAT
AGGCAGTTAAAGATGGATCTTAGATCATCCCCACTGGAAGAAAACTCATTAATCTATGTG
GATGTGGAACCCTTATTCTAAATATGTATACTGAGCATTTCTAGATTCTCTGAGTTCCTG
AGATAGTCTTGTGTTGTCCCAGACCATTGGATTTTGTAGCCAAATACTTGATTAATGCAC
TGTTCATATATTGTTATGCGTTGTCTTGTAATTATGGATGCTCTTTTTTTCTGT



Homology of Contig U35_34011 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None