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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18903_PI390587928Hv_44K_v2TGGAAATACTGATGACAAAGAGTGTCCATTGAAGCTGCACGAATTGGCTTGGAAGTTCAT396GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36320030872e-241106 - 116510060 / 60plus ABC14564 ABC14565 ABC26665
MLOCMLOC_5818.118153e-211136 - 11959758 / 60plus ABC14564 ABC14565 ABC26665
JLOC1JLOC1_3768.126642e-21676 - 7359758 / 60plus
Harvest21ABC266656173e-25397 - 45610060 / 60plusABC26665
Harvest35U35_280456173e-25397 - 45610060 / 60plus



Contig Sequence (617 bp)

>U35_28045 617 Hv_44K_v2
TCTTGTTGATCATGTGTACAACACCGTGAAAGAGAATTTCGATGTTGCAGCATGGGTAAC
TGTGTCGGAGAGTTACCGTATTGAGGATTTGTTGAAGAAGATCGTCGCCCAGTTCGGCAT
CACAGTCAACGTCGCAAACAATGAGATGAGAGGCCTATCAAAGTACATCCACAACTACCT
TCAAGGTAAAAGGTACATCTTGGTCTTGGATGATGTTTGGGCTGAGCACTTGTGGTCCGA
GATAAGGGATATCTTTCCAACATCTAATTGTACCAGCCGAGTTATTATCACATCAAGAAA
GCAGGCAGTGTTGGCAACCAGGGAGTCTGCATCTGCAATTCACTTGGAACCGCTAGAAGA
ACATTACTCCTGGCTGTTATTTTGCAAAGGAGCCTTTGGAAATACTGATGACAAAGAGTG
TCCATTGAAGCTGCACGAATTGGCTTGGAAGTTCATAGCAAAGTGTCAAGGCTTGCCTAT
TGCTATTGCGTGCATTAGCCGCCTACTCTCCTGCAAGCCCAAAAATTCCGTCGAATGGGA
GGATGTGTACCAGTGTTTGGATTCGCAGTTTGCGAAAGATGTGATCCCTGATGCTCATAT
GATCCTAAAGGTCAGCT



Homology of Contig U35_28045 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7ChrUn.fgenesh.mRNA.299231e-70protein|expressed protein
Brachypodium v1_2Bradi2g39847.19173e-87
Arabidopsis v10None