barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18866_PI390587928Hv_44K_v2AAATATGTGACTTCAAGAATGTTGGCTATGACATTGTAAAGAAATGTGATGGCCTACCCC213GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_56905.522319e-22865 - 91910055 / 55minus ABC26671 ABC26675
MLOCMLOC_56905.342839e-222410 - 246410055 / 55minus ABC26671 ABC26675
MLOCMLOC_56905.442599e-222403 - 245710055 / 55minus ABC26671 ABC26675
MLOCMLOC_56905.142709e-222493 - 254710055 / 55minus ABC26671 ABC26675
MLOCMLOC_56905.242719e-222493 - 254710055 / 55minus ABC26671 ABC26675
JLOC1JLOC1_36829.141375e-221692 - 174610055 / 55plus
Harvest21ABC266752763e-25214 - 27310060 / 60plusABC26675
Harvest35U35_280552763e-25214 - 27310060 / 60plus



Contig Sequence (276 bp)

>U35_28055 276 Hv_44K_v2
TACTGGTGCTGGATGATGTGTGGAAATCTGATGTCTGGAATGATCTTCTTCTATCGCCTT
TCATGAGAGCCTTGAACTTCCATATCCTTGTCACCACAAGAGACCTGTGTGTTTTGTCAG
AAATGCATGCAACATATATCCACCAAGTAAACAAAATGAATTACAGTGATGGCTTAGAAT
TGCTTATGAAGAAGTCCTTTCAATCATCCGAGCAAATATGTGACTTCAAGAATGTTGGCT
ATGACATTGTAAAGAAATGTGATGGCCTACCCCTAG



Homology of Contig U35_28055 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None