- Probe CUST_18822_PI390587928
- Source Contig U35_41300
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_18822_PI390587928 | Hv_44K_v2 | AAATTTTAGAAATGAAGCCAATTGATGTACTTGCAGAACAGGGACAACCCCAGCTTTTTT | 26 | GeneList: darkslateblue MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 2.142 | 3.024 | 1.747 | 0.717 | 0.278 | 0.277 |
| Raw | 168.482 | 382.072 | 184.708 | 117.806 | 16.207 | 18.275 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_41300 | 386 | 3e-25 | 27 - 86 | 100 | 60 / 60 | minus |
Contig Sequence (386 bp)
>U35_41300 386 Hv_44K_v2 TTTTTTTTTTTTTTTTTGAAAATCAAAAAAAAGCTGGGGTTGTCCCTGTTCTGCAAGTAC ATCAATTGGCTTCATTTCTAAAATTTCGCGGGGCTGCCTAACATCATATACTCTGGGAAA AGTGAACAAAATTTGTTGTTGCCCCCAGGGAGGTTACCCTGCAAAACTCAAAAAGCCCCT GGGGGGCTACAGAACAACTCGGGGGAAACTACAGCCGGGGGGGCCACTCAATCCCACTCT TCCGATCAGCTCTCGGGCTTGAACCCTTGCTTGGGGTTCTGCTGCTTCCCTTTCCCCTTG GTTCCCCGTCCCTTGGAACGGGGCCCCTCGTCTTCTGCTTTTCCTTCTGCTTCGGCCCCC GCTGCGCTGGGAAAACCTGTTATCTG
Homology of Contig U35_41300 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |