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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18627_PI390587928Hv_44K_v2TTCTCTTCTTGTATATGTTTGATCGGTTGCCACTAGTATCTTAACCCCCGATGTTTACGG489GeneList: salmon
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 6.1093.4520.8631.0740.8651.372
Raw 48.63647.4519.43419.7513.5629.300



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_68105693e-25490 - 54910060 / 60plus



Contig Sequence (569 bp)

>U35_6810 569 Hv_44K_v2
CTACAACCACTTCAAGATGTGCATGTCGGGGGAGATGCAGCTGTGCGACATGGACGCGCG
GTTCATCAGCTGGGACGGCGTCCACTTCACGGAGTTCGCCAACGCCATCGTCGCGTCCAA
GCTGCTCACCGGCGAATACTCCAAGCCCAGGGTCAGGATCGCCAGCCTCGTCAACTCCAC
CGCGCCTCACGATGGCTAGCCCTCCATCGATCGTCGTCTATCTGGATCTGCCGGTGCCAT
TGATTTGATTTGGTTGGCCTACCACTGCCAGAGATGATGAGAATGTGTGCATGCTGCAGC
AAATCAGTGAGTGGGCTGAGAGCAAACATCTAGGAGTGTCTCTTTTCTCAAGGCTCAGAT
GAGTGAAGGAGAGAAAGTAGTGAGTTGACCAAGAGGGAAAATTCATGGACGACCTAAAGC
AAGGCACATTTGACTGACGTGTGTGTAATTCGCTTTGAAATTTGATCAAGGAATTGATGG
GGTGCACAGTTCTCTTCTTGTATATGTTTGATCGGTTGCCACTAGTATCTTAACCCCCGA
TGTTTACGGCGCCCTCGAGCGCTCAGAGG



Homology of Contig U35_6810 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None