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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18520_PI390587928Hv_44K_v2AGTAACGAAGTGCAGTTCATGTTAAGAAGGGATGGTGACAGATGTTCTATATTCAAAAAA11GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5891.9521.1860.6720.2640.268
Raw 1418.9072731.8121430.1671284.891176.865195.944



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC477866373e-2512 - 7110060 / 60minusABC47786
Harvest35U35_470176373e-2512 - 7110060 / 60minus



Contig Sequence (637 bp)

>U35_47017 637 Hv_44K_v2
TTTTTTTTTTTTTTTTTGAATATAGAACATCTGTCACCATCCCTTCTTAACATGAACTGC
ACTTCGTTACTGTGTAGCAGCACCACAATCACAGATTCACAGGCATACATATTCAGGAAT
TTCCTACACCCCTACCCTATTCCCTACTCCTGCACTGATACGAGATGCTACAGCCACAGG
CTCTGCAAAACAGGGAGGGAGCCCTGCCCTTGCGCTCATGCATGTTCACCACACGGGACA
AAATTACATGCACTCAGCATATGCTACCGTGGGGCAAAACCACCACTCTATCAGACTATG
GCTGAAATCCGAGCATGATGCGCAGCTCCTCAAGGCGCAGCTCCTTCTCCTCCTTGGAGC
TCCCTTTCTTCCTGAACGCGCCGCTGATCAGCCGCTTCTTCCTCTCCTGCAGCTCCAGGA
CCCTCTCCTCGATGCTGTTCTTCACGATCAGCCGCACCACCTTCACCGCTTTCTTCTGCC
CGATCCGGTGCACCCGGTCCATGGCCTGCTCCTCCGTCCCGGGGTTCCACCAGGGGTCGA
ACAGGTACACCGTCGACGCCGCTGTTAGGTTCACTCCAGCGCCTGCGGCCTTCAGGCCGG
CCAGCAGTACCGTTGGGACATCGGGGCCGACGACCGC



Homology of Contig U35_47017 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None