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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18507_PI390587928Hv_44K_v2GCTGTGTTACTACTACAGATTGACTCGTACCCATTCCGAAAGAAATTAAGGTGGCCTAAA838GeneList: yellowgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.7132.2282.1011.2210.5090.510
Raw 196.594943.009765.216683.069102.156111.274



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_59314.115423e-211468 - 15289759 / 61plus ABC20555
JLOC1JLOC1_38591.113192e-211242 - 13029759 / 61plus
Harvest21ABC205556083e-2514 - 7310060 / 60minusABC20555
Harvest35U35_230699113e-25839 - 89810060 / 60plus



Contig Sequence (911 bp)

>U35_23069 911 Hv_44K_v2
TAGTCAGGTCGATGAAGCTTTAGTGTACCCAAAGCAATAGCATCATTCAAAGTCTAAAAA
TTTGCAAGTAATTTCACAGTATCACAAACTGCGTCACTGAGAGCGCGCGTATTAGAATTT
ATTCTCTTCATTCACGCAAGAAAATCAGCGGCAAATGGCACAAAAAGGTAACGCGCCCAG
CGGCCGCTGTTGGAAAGTGCGAAGGGCCTTGCACGAAGCCAAGAACAAGAGATACAGTAC
GAATGGAATGCTCGTACCCAGATTACGATGTGGTTCGACAACACCGAAACAAAAGCAAGC
TTGCTACGCGACTACGCAAACAAGTACTGGAGCGGCCTGCTGCGGGACTACTACGGGCCA
AGGGCCGCCATCTACTTCAAGCACCTGATATCAAGCTTGAAGAAGAAGGAACCTTTTGCG
CTGGAAGAGTGGAGGAGGGAGTGGATCAGCCTCACCAACAACTGGCAGAGCGACAGGAAG
GTCTTTGCGACAACGGCCACCGGAGACGCTCTAAACATCTCCCGGGCCCTTTTCACCAAG
TACCTGCGCAACGCCGATTCACTTGGGCTAGATGGTATGGACTCATTTGTAAAGCCTATA
AGCTTGTAAATTTCAAGCTCCTGGGTATGTTTCTGTAAGACATTTATAGGAGATCAGATG
GGATGTTTTAGCTAGAGTTGCCGAGGTAGAGTTCATCAAACGGTTGGGTGTTTGGGTCAG
TGATTTTTCGCTCCATGATCTGATTGCACGATGAAACATACCGTTAGTTTTGTGTTCGGT
TTGACTGGTATGTAATCATAAAGCTGGGAACCAAAATACCATACCTGTTGTTACTTCAGC
TGTGTTACTACTACAGATTGACTCGTACCCATTCCGAAAGAAATTAAGGTGGCCTAAAAA
AAAAAAAAAAA



Homology of Contig U35_23069 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g55730.17975e-69protein|alpha-N-acetylglucosaminidase, putative, expressed
Brachypodium v1_2Bradi5g24207.18307e-76
Arabidopsis v10None