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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18444_PI390587928Hv_44K_v2GAAGTCGGTAAGCAACTTTTGCTTCAGTAATGAAGTATGCAATTTATTTGAAGAAAAGGG660GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.7851.9711.2460.7900.2810.404
Raw 337.309576.604321.632326.87340.07562.164



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_230887333e-25661 - 72010060 / 60plus



Contig Sequence (733 bp)

>U35_23088 733 Hv_44K_v2
GGACTTGTTGAAGCATGGCGCCTCCCTCCTGCTGGCTCGCCTGCTATACAGCCTAGCATT
CTCTTGTAGGCAGTACCTGACACAAGGAATGATACTCTCAATATCAGTGCCAGCTCTGAT
GCGAGTAGAAGCGCTTGTCTCGTCTTTCAAGGGCTCACAGGATAGCTGTCTTGCTGATGC
TGCTTCGTGTGTGGGTGCTGAACTGCAGCGCCTACCTCGCTGTGGTTGAGCAGAGATGTG
GTGAAGGAGCTGGTCAGTTGGCTGGCATTACACAAGTGATCTTAATAGGAGGGTCTTGGT
TTGGTATCTCTGGCGCCAAGTGTATCAGCAGGGCCATTGCCAGCCTCATCATCTTATAAG
GCATGCTGCTGAACCCAGTTGCTACTGTCTGGCACCGGAGGATCTTTAAAAAAAAAACTG
TCTGGCACCGGAGTGCTGTCCGTGTGCAGGACACCGATGCATGCTATGTAATCTTTATCC
GCGATGATGCGGGGCTGCTGTATATGGTACTTTTGGCCAAATCTGTATTTGCCTTGCCAG
TTTTGGTTGGCATGTAGGTTTTCAGTTCCATGTAATTCCCTAGTTGCACATCATGATCAT
GTCTTATTTCAGTTACCAAGCAAGTGGAGGAAATTTCCATTTTTGTTGAGATCTCTGTAC
GAAGTCGGTAAGCAACTTTTGCTTCAGTAATGAAGTATGCAATTTATTTGAAGAAAAGGG
GGGGCCTCAGTAC



Homology of Contig U35_23088 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None