- Probe CUST_18430_PI390587928
- Source Contig U35_32243
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_18430_PI390587928 | Hv_44K_v2 | AGTGATCCTGAAAAGAATGGCACCCCCAATGTTTCCTCAAATAACAACAGTGGTTTTACG | 181 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | AK370086 | 4844 | 7e-23 | 2083 - 2142 | 98 | 59 / 60 | plus | ABC16584 |
MLOC | MLOC_55774.2 | 5732 | 7e-23 | 2068 - 2127 | 98 | 59 / 60 | plus | ABC16584 ABC16998 |
MLOC | MLOC_55774.1 | 4952 | 7e-23 | 2074 - 2133 | 98 | 59 / 60 | plus | ABC16584 |
JLOC1 | JLOC1_36016.2 | 4748 | 4e-23 | 1748 - 1807 | 98 | 59 / 60 | plus | |
JLOC1 | JLOC1_36016.1 | 4897 | 4e-23 | 2088 - 2147 | 98 | 59 / 60 | plus | |
Harvest35 | U35_32243 | 241 | 3e-25 | 182 - 241 | 100 | 60 / 60 | plus |
Contig Sequence (241 bp)
>U35_32243 241 Hv_44K_v2 TGTGAAGGCAACTGAGCAGAAGTTTGATTCATAGATTAAGGAGCAGAAAGTTCAACATGT TAAATTTGAGAAGAAAGTTGAATCAACCTCATCGAAGGAGAATGTTATCAATTCTTCAGT TACTGAACAGCCTATAACATCCACATCGAAAGATGTCTCTACACCAGGCTTGTTTTCGTT CAGTGATCCTGAAAAGAATGGCACCCCCAATGTTTCCTCAAATAACAACAGTGGTTTTAC G
Homology of Contig U35_32243 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |