- Probe CUST_18341_PI390587928
- Source Contig U35_32292
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_18341_PI390587928 | Hv_44K_v2 | ATATCGCTCGGAGTGATGGGCATACAGTGCGGAAACAAACAGGTCGTGGTCTAGCGGCAC | 137 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_68598.1 | 3251 | 7e-23 | 301 - 360 | 98 | 59 / 60 | plus | ABC12444 |
| MLOC | MLOC_68598.2 | 2944 | 7e-23 | 131 - 190 | 98 | 59 / 60 | plus | ABC12444 |
| JLOC1 | JLOC1_45396.2 | 3025 | 4e-23 | 161 - 220 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_45396.1 | 3053 | 4e-23 | 161 - 220 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_32292 | 264 | 3e-25 | 138 - 197 | 100 | 60 / 60 | plus |
Contig Sequence (264 bp)
>U35_32292 264 Hv_44K_v2 AAACAAAAAAAAAAACGCGGGAGCGTCCGCAAATGTTATCCGTCCTCGCGTGCAAGCTGA GCCCCTGCACAGGTGGTGGTGCAACCGTGCAAGATAAAGCCACGAGGATAGGCAGCAGGC CAGTATCCACCGGATTGATATCGCTCGGAGTGATGGGCATACAGTGCGGAAACAAACAGG TCGTGGTCTAGCGGCACGAGCTTCCCCCCTCTCCCGATCGTCGACCAGGCCCGCTATATA TTCGACGGCTCGGCGGTCGCCCCC
Homology of Contig U35_32292 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |