- Probe CUST_18333_PI390587928
- Source Contig U35_44278
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_18333_PI390587928 | Hv_44K_v2 | GTCGTGGATGCGGCGGAGCGAGCTCGGCGAGCGGGACCTCGCCTGCGCCTGCTGCGGCGT | 235 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_16246.1 | 3059 | 2e-24 | 44 - 103 | 100 | 60 / 60 | plus | ABC33970 |
MLOC | AK368027 | 4196 | 7e-23 | 1249 - 1305 | 100 | 57 / 57 | plus | ABC33970 |
JLOC1 | JLOC1_11180.1 | 3229 | 8e-25 | 61 - 120 | 100 | 60 / 60 | plus | |
Harvest21 | ABC41889 | 295 | 3e-25 | 236 - 295 | 100 | 60 / 60 | plus | |
Harvest35 | U35_44278 | 295 | 3e-25 | 236 - 295 | 100 | 60 / 60 | plus |
Contig Sequence (295 bp)
>U35_44278 295 Hv_44K_v2 TCGCCGCCTTCTTCGGCCTGCCGCCGCCCTGCGCGCTCTGCACCCGCCTCGCCGCCGACA GCCTCTTAGACCGCGCGCCCCGCCACGGAGCCGAGCCCCTGCGCCGCGTGCTCTGCGACG GGCACGCCGCCGAGGTGTCGCGCCTCGGCTACTGCCGCGCGCACCGCCGCCTCGCCGACG CCGCCGACATGTGCGAGGACTGCGGGGCGCCGGCACCGTCCGGGAAGGCTCTGCTGTCGT GGATGCGGCGGAGCGAGCTCGGCGAGCGGGACCTCGCCTGCGCCTGCTGCGGCGT
Homology of Contig U35_44278 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |