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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_18237_PI390587928Hv_44K_v2AAATTGGATCCAGATTTGCTGGTACCGTGGAATGCAATTACTGCAGTACTGCTTAAAAAA550GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0791.4791.3421.0400.4530.347
Raw 885.6051875.9691515.2831810.334283.146234.318



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC151716213e-25551 - 61010060 / 60plusABC15171
Harvest35U35_215686213e-25551 - 61010060 / 60plus



Contig Sequence (621 bp)

>U35_21568 621 Hv_44K_v2
GAGCCAACCCAGCCCGCACAGGTCGCGATCTGCCCCCGCAGAGAAACAGAGCCGCGCACG
CATCGTTGTCGGTCGACATCCCTCCCGCAGTCCACACCTCCGCCTCCGAGTCCGGCGACC
GCGAGCAACCCAGCCGGAGACCGCAGCGAGCGAAGCGCGATGGGGATGTGCTCGTGCTGC
TGCCGGTGCCTGGAGATCATGTGCGCCATCCTCCTCCCGCCCCTCGGCGTCTGCCTCCGC
CACGGCTGCTGCTCCATGGAGTTCTGGATCAGCGTGCTGCTCACCATCCTCGGCTACCTG
CCGGGCGTCCTCTACGCCGCCTACGTCATCTGCTCCGTCGACCCCGAACGCGTCCGCCGC
CGCGGCGACAGCGACGACGACTACATCTACGTCGCCTGAGCGGCAACCAGCCGCTGCTCC
TCCCCTCCGTCCCCCGCCGCGTGGTCTCTCTATGGGATTAGGTTAGTGGAATGAACCAGC
CATGTTCCTGCCCCCCTGTATATGTATATGTAATGTATGTGTACACTTTGGATGACAGCT
TATATACCTGAAATTGGATCCAGATTTGCTGGTACCGTGGAATGCAATTACTGCAGTACT
GCTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_21568 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None