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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17864_PI390587928Hv_44K_v2CCGGAAAAAGAAACTAAACGTACAAAACATGTTTAGTTCGAAGTGTACTCTGTGCAATAT304GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_2171.122453e-21188 - 2479758 / 60plus ABC10197 ABC19539
MLOCMLOC_2170.432863e-213125 - 31849758 / 60plus ABC10197
MLOCMLOC_2170.639363e-213182 - 32419758 / 60plus ABC10197 ABC19539
MLOCMLOC_2170.139463e-213173 - 32329758 / 60plus ABC10197 ABC19539
JLOC1JLOC1_1306.335962e-212997 - 30569758 / 60plus
JLOC1JLOC1_1306.236452e-213046 - 31059758 / 60plus
JLOC1JLOC1_1306.137272e-213128 - 31879758 / 60plus
Harvest21ABC101983763e-25305 - 36410060 / 60plus
Harvest21ABC1019714431e-231280 - 13399859 / 60plusABC10197
Harvest35U35_45473763e-25305 - 36410060 / 60plus
Harvest35U35_454614431e-231280 - 13399859 / 60plus



Contig Sequence (376 bp)

>U35_4547 376 Hv_44K_v2
GTCCATGGGTGGATGCAACCGTTGCCAGATGATCAACTTGCACCAGAATGCGGGCCAGGT
GATCAAGTCAAAGGAACCGCTAGCAACGCTAGCCTCCTACCGACGAGAAAAGGGCAAGAT
TATGTTTGGTGTCCTGTTGAACTATGAAGATGGTTTGGATGGAGAAGAAGAGACCGTTGC
GGAGAGATGGCTCCAAGTAGGGCAAGAAGTGCACACTTCGACAGTGTGATTTCGTGTCCA
GCTACGCACGCTGAGAGATGTCTATATGTAATATTTTTGTATAGAGACAGCTTGCCTTTC
AACACCGGAAAAAGAAACTAAACGTACAAAACATGTTTAGTTCGAAGTGTACTCTGTGCA
ATATTTTTAGCTCATC



Homology of Contig U35_4547 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None