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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17763_PI390587928Hv_44K_v2TGGTGTGATGGTGTGTATGTTTATCCAATCAAGAGGTAGTCTATGGTGTGTAGGTTTAAA876GeneList: lightyellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0200.1050.9191.8101.0791.094
Raw 192.0201699.40213467.24339722.6338736.0839525.930



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_45611.110565e-22889 - 9479858 / 59plus
Harvest35U35_29169503e-25877 - 93610060 / 60plus



Contig Sequence (950 bp)

>U35_2916 950 Hv_44K_v2
AAAACACACACCGTTTGATGGCAGTCCACAAAACAGTGAGAAGGCGGGTGTATATATAGA
GCGCCGCGAAAAGAGTTCATCACCCTCGCACTCGAACCGCGACAGAACAAAGCTGACGCA
ATGGCGGCCATGCTCTGCACCAACACCCCCGCCGCCGCCGCCCTTCCCCGCCTCCCGCGC
CGACGCACACCCCAGTGCAACGTCGCGCTCGCCGCTCCGGTGACTGCCCGTCTCTCCATC
CGCCGCCGCAGCCTACGAACTCCAGGGCTGCGCTGCGCCGGCACGGAACTGGGGGTCGCG
GAGGCAATGAAGCTGGCCGCGGCCGTGCCCTTCGGGCAGAGCTTGGTGGCGGTGGACAGC
GCCGGCGACGAGGCGGCTGCCAACAAGCTGGGCTTCAAGGAGATGGCCACATATGCCATA
TACGGCACCGGTGCTTTCTTCGCTGGATGGGTTTTGTCCGCTGTTGTTTCAGCAATTGAC
TCCATCCCCTTGCTCCCAAGGATACTGGAGATGGTGGGCCTCGGATACACGGTTTGGTTC
AGCTCTCGGTATCTTCTTTTCAAGAAAAACAGAGAGGAATTGTTTGCCAGAGCTTATGAT
CTCAAAATGAGAATTGTTGGACCCCGCGATGCATGATGTGTTCACATGTGGTTGGGCGTC
TGAGTGTAATTTCTCTCTCGTTTTGAGAGAAATACTATAAGTTGTCTGTTTTAAAAATAT
GTCATTGAAGTTGTGATGTAGTGTTCGTACTGTTTTAAAAATAATGTATGGCGTGTTTCT
TAGAGCAAGTAAGGCTCATGTTGGACATGGCTAGGCCAAATATTTCCAACAGTTACCCCC
TTTTATGCACAGCATGGATGAAGGCTTATGGGAGGTTGGTGTGATGGTGTGTATGTTTAT
CCAATCAAGAGGTAGTCTATGGTGTGTAGGTTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_2916 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None