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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17536_PI390587928Hv_44K_v2TAGTAGGGAGTAGTCTCGATCGAAGGTACACAAGGAAGTGAGTTTAGATGAGTAGAAAAA731GeneList: orangered4
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.0332.3601.0460.8630.3260.334
Raw 1193.4652283.714843.5841132.603145.231163.532



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC208738033e-25732 - 79110060 / 60plusABC20873
Harvest35U35_102898033e-25732 - 79110060 / 60plus



Contig Sequence (803 bp)

>U35_10289 803 Hv_44K_v2
AAAGGTTGGATCACGTGAGAGGATGAAGCCAATAAAAGAAGCGCTTCCAGAAAATGTAAC
GTACGAAATGATCAAGATATTCTTCGCAGCAGACGATCTTGGAGTGTTAGAGAAGACTTT
TGGCAACGCTCCAACTGACGGGGCTGCTGCCCAAACAGCCGAGTCGGCAAAACCCTCTTC
CCATGGCAGCGAAGCTCTGGAGAAGGGTGATCAGGGAGAACCCGTCATCATATCAGGCGC
CTGTGATTCAAGCCCTTCGCCAAAGAGATCCCAGGCCGCCAATGTGGATGAGCCAGTAAA
GAAGCTGCAGAAGGTAGACGGGCAAGGGACCGCAAATGTCGCGACCGAGGACGCTATACT
TGAGCTGGCCGAGAGCCGCAATGGGGTTTCGTTGGAGGACGCCGTGAAGCACTTCAGCGG
GTCGAAACGGGAGTCCGTCGTCGAGATGCTGGAGAGCCTCCGTTGCAGCTTCGCGGTGTA
CATGAAGAACGGCCGCTACTTGGTTCTGTGACCGGCGGAAGGGAAGGGAAGGGAAGGGAA
GGAAGGATGGCGCCGTTTGCTTGCTCTTGGCTTGTCCGTGGCGTCAGCGGATGTTGGTTA
TGGGTTTGGGGCTCTGGGACCTTGACGGAGCTTTGCATCCCAGTTTCCATATTTTGAGTG
CTTGCCTTGCCATGGGACGGGAATGCTCGTTGCTTCTGTATATAGTGCTACGTGGGTGCT
TGCTTTTTAAGTAGTAGGGAGTAGTCTCGATCGAAGGTACACAAGGAAGTGAGTTTAGAT
GAGTAGAAAAAAAAAAAAAAAAA



Homology of Contig U35_10289 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g17580.18951e-64
Arabidopsis v10None