barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17431_PI390587928Hv_44K_v2GATCTAACACCACAAAGAAGACTTTCTAGGGAACAACATATCATCAATGTTTCGCATCGT23GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_47562.17993e-21347 - 4069758 / 60minus None
MLOCMLOC_47562.29043e-21364 - 4239758 / 60minus ABC30922
MLOCMLOC_47563.19943e-21454 - 5139758 / 60minus None
JLOC1JLOC1_30652.15882e-21337 - 3969758 / 60minus
Harvest21ABC461624203e-2524 - 8310060 / 60minus
Harvest35U35_462814203e-2524 - 8310060 / 60minus



Contig Sequence (420 bp)

>U35_46281 420 Hv_44K_v2
AGGCTGTTGGTCCTCCACAATGGACGATGCGAAACATTGATGATATGTTGTTCCCTAGAA
AGTCTTCTTTGTGGTGTTAGATCTGCTACTTTTGGTTAGCCTGTTTTCCTTCCTTTTTTT
ACATGTTTTTGAAGTCTACATATTCATCAAAACGATAATGACGTTCTGTTACATGATGTT
TACTCTCCTTTAGATTGTTTTTTTTTTGCAAAAAACATTTTGTATCTTCTCTCCGCTCTA
TTTGCCCAACAAATATGTATAAGAAAATCAACTGTGCACATGTAGTGGCTGCTTTGCTTT
CTATTGTCATTTTGCGTTCTTCAAAAGATATTTTGCATGTTGTTTTCACTGTGCTGTATT
GCTTTGGCTTGGGCTCATGTTTTATGAAAATGGCTGGAGCACTGCCTTATAACTAAAAAA



Homology of Contig U35_46281 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None