- Probe CUST_17425_PI390587928
- Source Contig U35_46289
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_17425_PI390587928 | Hv_44K_v2 | GGCTCGTCAACGAGCTCCGCGGCAACCGCCCGCTCTTCGGCCCGGACCTGCCACAGTCCG | 55 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_59333.4 | 2998 | 2e-24 | 1362 - 1421 | 100 | 60 / 60 | plus | ABC05572 ABC19896 |
| MLOC | MLOC_59333.1 | 3927 | 2e-24 | 2042 - 2101 | 100 | 60 / 60 | plus | ABC05572 ABC19896 |
| MLOC | MLOC_59333.5 | 3051 | 2e-24 | 1273 - 1332 | 100 | 60 / 60 | plus | ABC05572 ABC19896 |
| MLOC | MLOC_59333.3 | 3231 | 2e-24 | 1513 - 1572 | 100 | 60 / 60 | plus | ABC05572 ABC19896 |
| JLOC1 | JLOC1_38609.1 | 3799 | 8e-25 | 1863 - 1922 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC46182 | 115 | 3e-25 | 56 - 115 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_46289 | 115 | 3e-25 | 56 - 115 | 100 | 60 / 60 | plus |
Contig Sequence (115 bp)
>U35_46289 115 Hv_44K_v2 ACNCACCTCNACATCNGCTCCTACCGGGACTGGCCCGAGGAGCAGCGCCAGGAGTGGCTC GTCAACGAGCTCCGCGGCAACCGCCCGCTCTTCGGCCCGGACCTGCCACAGTCCG
Homology of Contig U35_46289 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |