barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17146_PI390587928Hv_44K_v2TTGGTGGAGCAACAGTTTTGGTGTGCATTTGTTGGAAACTTAAAACATTTTGTAACATGT86GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35774119303e-211832 - 18919758 / 60plus ABC23989 ABC43084
MLOCMLOC_58319.223143e-2130 - 899758 / 60minus ABC23989 ABC43084
MLOCMLOC_58319.123333e-2152 - 1119758 / 60minus ABC23989 ABC43084
JLOC1JLOC1_37880.122742e-212014 - 20739758 / 60plus
Harvest21ABC430844393e-2587 - 14610060 / 60minusABC43084
Harvest21ABC239895106e-22333 - 3929758 / 60plusABC23989
Harvest35U35_448644393e-2587 - 14610060 / 60minus
Harvest35U35_129515106e-22333 - 3929758 / 60plus



Contig Sequence (439 bp)

>U35_44864 439 Hv_44K_v2
TTTTTTTTTTTTTTTTTATACAGGGAAAAAGTCACTAAAACTCTTCTGTGCCAAAACAAA
ATTTTTCAACATATTTCCACCTACATACATGTTACAAAATGTTTTAAGTTTCCAACAAAT
GCACACCAAAACTGTTGCTCCACCAAGCTTTGAAACAAACTACAGGGCTTCTCAGCAAAT
AAATCATTCCTGGTCACCATGTGTTTGAAAAATAAAAGTTCACAAGGGTTCCTTTTCCTT
TCAGGCACATTGGACAACCTCACCAACTAATAAAACATGTTCCTGGAACAACTGCAGCGC
TCACATATTTGCCACGGACCAAAAATAGGCCTTTTGCTCCGGGGCCTGCTTATCGTTCTT
TAACTTGGACATGTCCATTTTGTATCCATTGGTGGGGGCCACTCCATCCCAATGACCCCC
GGGTTTTATGCCATAACGG



Homology of Contig U35_44864 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None