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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17137_PI390587928Hv_44K_v2AGACAGCATGGTCTCTAATCGTATGCTTCAGCTGTAGCTCATCTTTAACTACTTATAACT486GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5241.6341.1350.8830.2600.293
Raw 41.05169.46542.33452.2684.0015.717



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_328985493e-25487 - 54610060 / 60plus



Contig Sequence (549 bp)

>U35_32898 549 Hv_44K_v2
TGGGTGAGGTCATAGAGATGCTGGAAGGCGGCGCTGATGGCTTGCAAATGCCTTCCAGGC
CGTTCTTCTGTGATGAAGGGCACATCCATATTGAGGATACTTACCAGTTGTCATCCGAGC
TGCCTGAAATCTCTGAGGAAGATGAATGAAAATAAAGTGTGTGTGAGATGTGATGTACTT
AGATCCTGAAAAGCTGAAGCAAAGGTCGTAGCTGTACCGAGTATGAAACTAATCTACTAT
GTGTGTTTCAACTGCAGAATCATGTAATAGCTAGCAGTTGGATGATGGGCTAGCTAGTCC
AATTGCTATGTCCATGGCAAGGTGCTAGAATGTAATCATCTTTCTGGAAGGCACGTAGTA
TTTGAAAATTCTGTTTGGTGAGTAATAGCTTGCAAAATATGGAGTTGTATTTGCAGTTCT
GTGCAAGCATTGTTAGCATGAATATATATAGTGGGTGTACTATGGGTGCTTGTAGTGGAA
ACAGAAAGACAGCATGGTCTCTAATCGTATGCTTCAGCTGTAGCTCATCTTTAACTACTT
ATAACTTTT



Homology of Contig U35_32898 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None