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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_17004_PI390587928Hv_44K_v2TGAGGGGGCACTTGCAGATCACAAGGAACGAAACTGATACATGATCAATTTCATGTTACA772GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.6341.3701.1140.9500.4570.316
Raw 163.572213.852151.730201.48134.55625.834



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_37787.142952e-24322 - 38110060 / 60minus ABC21432
MLOCMLOC_37787.242942e-24322 - 38110060 / 60minus ABC21432
JLOC1JLOC1_24507.242988e-253946 - 400510060 / 60plus
JLOC1JLOC1_24507.140858e-253733 - 379210060 / 60plus
Harvest21ABC214328353e-254 - 6310060 / 60minusABC21432
Harvest35U35_132668353e-25773 - 83210060 / 60plus



Contig Sequence (835 bp)

>U35_13266 835 Hv_44K_v2
GCCTCGTGCCGCGCTGCGAAAGGTGTGTACAGATCAGAGAGAAGAGGTGAGGGATCATGC
TCTGGTATTGTTGCACAGATGCATAGTAGTCGATGGAATGTCGGTTCCATCTTCGGCCTG
GTTGATGTCATTCGACATTGTCTTCCAGTTGCTCGACGAATTGTTAGAGATTGCGCAGAA
TTTCTCGCCAAAGCATTTCAGAAACATGGAAGCTTCCCTCTTGCATGCTGTAAAGCTGTT
ATCCAAACTATCCTTGCAGTCACTCAACGATCTTTCGGCGCACAGCGGTTTCAGTAAGCT
GTGGGTGGAGGTACTGGACATGGCAGAGAAGCTCATGAAAGCCAAAGTAAGAGGGGGCAG
CAGGACTGAGAGGTTGCAAGAGACTGCCACAGAGCTACTCAAGAACATGCTGCTGGTGAT
GAAAGCGAGCGGGGTCTTATCGAGGACGAGCGCCGGCGGGGAGAGCAGTTTGTGGGAAGC
AACATGGCTTCACGTTAACAAGATGGCGCCTTCGCTTCAGTCGGTAGTTTTCCCTGATTA
TGATGATGCAGTACAAGGTGCACAAAGCAAGCTGGATATCCCAGCAGTTTCTGAGGGGAG
GTTGGTCCCAGTTTAGATGAACAAACTGTACTACTGGATATAATTATGTATTTGTAGGTT
ATAGTTAGAAGCAGATGATTTCGAATGTAGTACTACCAGTATACTTTTTGTTATAAATAA
CTTGGATTTCATATAGTACTAGTCAAATCCATGGTCAAGTTTGAGTAAAATGTGAGGGGG
CACTTGCAGATCACAAGGAACGAAACTGATACATGATCAATTTCATGTTACAAAC



Homology of Contig U35_13266 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g22090.114253e-78protein|pattern formation protein EMB30, putative, expressed
Brachypodium v1_2Bradi1g74210.113932e-75
Arabidopsis v10None