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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16894_PI390587928Hv_44K_v2TAAATGAACTTGAGGCCTTGCCTTCCTTTCTTTTTGCCTGGCTTTCTAGCTATTAGTCGT42GeneList: darkred
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.8521.6302.0261.3990.5800.578
Raw 2195.4786506.1076909.3107413.3901097.1201179.195



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35698823163e-212255 - 23149758 / 60plus None
MLOCMLOC_5125.116103e-211524 - 15839758 / 60plus None
JLOC1JLOC1_3274.216372e-211460 - 15199758 / 60plus
JLOC1JLOC1_3274.117292e-211552 - 16119758 / 60plus
Harvest35U35_353478243e-2543 - 10210060 / 60minus



Contig Sequence (824 bp)

>U35_35347 824 Hv_44K_v2
GGGCGAATTGGGCCCTTTCGATGATGCTCGAGCGGCCGCTGAACGACTAATAGCTAGAAA
GCCAGGCAAAAAGAAAGGAAGGCAAGGCCTCAAGTTCATTTACAGCAAGTAAACGAGCTT
CAGGCAATTCGGTGCCTATGCTAGTTCACCAGGTACCAGACCAATGATATTGGCTCTGTC
AAATCACACTCTCTTCCAGCCCTACTACCATCACACTACCAAGTCTACAAACTGTATACA
ATTTATACAGTGACCAGAGGCAATGTCACCCTCATCAGGTCAGTTCAGTAGCCTCTTCAT
GTCGAGCGCCCGGTCCGAGCTCCGCTTGAAGTTGTACACCGACTCAAACGCCTCCATGCA
GACGCTGGAGAAGCCCCTCATCGCCTGGAAGACGTTGGGGAAGCCCGTCTGGAGGTTTTT
CAGGGTCATTGCCCTCGTTAGCCCAACACTCTTCTGGTGCTTGCTCTAGCGGCCGCTAGA
ATGAAGTACTATTATGTGGCTAAAATATTGTCTTGTCAAGACCACAAGCCATTAGTCGAT
ACATGTCCCGTGTAACGAAGACCAAATAGTAACAATGCTACCGCAGCAGCCACCTTGGTC
CCAATCACAGTCACTCTCGAGCGATACATGTCGCGACGAAGTTCCACCAACGACTTTGGC
TCATTGAGATGAGGAAAGTCAAGATCCGGCACTTCCACATCTAAAAATGCGCACAATGGC
TTCCAGCCATGACTAGCATGCCACTCCAGTAACCGACCTTCAGGTGTAAGTCTTCGAACC
TTTTCGATATGCTCATCAAATGATTCAAGAAGAGCTGGGTCAGC



Homology of Contig U35_35347 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None