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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16729_PI390587928Hv_44K_v2TATGTACATGATCAGTGCACACAGCACACCAGTAGTACTACTCGATCAGTTAGCTAGCTG73GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35906416562e-2485 - 14410060 / 60plus ABC09057 ABC09058 ABC44905
MLOCMLOC_55555.415077e-2387 - 1469859 / 60plus ABC09057 ABC09058 ABC44905
MLOCMLOC_55555.318927e-23100 - 1599859 / 60plus ABC09057 ABC09058 ABC44905
MLOCMLOC_55555.25697e-23100 - 1599859 / 60plus ABC09057
MLOCMLOC_55555.119157e-23564 - 6239859 / 60plus ABC09057 ABC09058 ABC44905
JLOC1JLOC1_35850.118604e-23327 - 3869859 / 60plus
Harvest21ABC486406333e-2574 - 13310060 / 60plus
Harvest21ABC0905715703e-2555 - 11410060 / 60plusABC09057
Harvest35U35_475156333e-2574 - 13310060 / 60plus
Harvest35U35_1824615703e-2555 - 11410060 / 60plus



Contig Sequence (633 bp)

>U35_47515 633 Hv_44K_v2
GCCCATCACCACATGATATAGGACTAGTCCTCATTCATCAGTCATCAGTTCATCACTCAT
ACACATACATACATATGTACATGATCAGTGCACACAGCACACCAGTAGTACTACTCGATC
AGTTAGCTAGCTGGTGATCCATATGGGGAAGGTGGTCGTNACGGAGGCCACGGCGCGCCA
GGTGGCGTCCTTCGTCCTCGGCGCCGCCGCTGCGCTCACCGTCGTCATGCTCGTCCAGTA
CCGGGCGCCGGCCGCCGGGCTCAGCCGTGCGAGGACACCGGGGCACTTTTCCGGCTTGAG
ATCATCATCATNAGATGACCACCACCACCACCACCGCAACGGGACGACTGCACGTGCCGT
AGTTCGTCAGGCGCCACCGGTCGCCACTAATGCAGAGGACGATCATCGTCGTCCGGCGAA
CGCCACAACAATCACAAAGCCCAATTCTACCTCTACTGCTGCTGCTCTACCTCTACGTCA
TCTTCCCAGCACAAATCACCATGGACAAAAGGGAGCCAATGAGGAGTNGCCGGAGTTCCG
GGGCCTGGCGGCAGCGGTGGCGCGAGCGGCGACGGACGACCGGACGGTGATCATCACGTG
CGTGAACCAGGCCTGGGCGGCGCCAGGCTCCCT



Homology of Contig U35_47515 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None