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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16531_PI390587928Hv_44K_v2GTGTCCGTGTAGTAGATAAGTTCTCTCTGCTTAGTTTTACAAGTTTCCCTTTTGTAAAAA774GeneList: grey60
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 6.1335.1811.2640.6570.2010.359
Raw 1161.2361626.822337.257297.19029.80758.148



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC0864212582e-211189 - 12469758 / 60plusABC08642
Harvest35U35_161018483e-25775 - 83410060 / 60plus



Contig Sequence (848 bp)

>U35_16101 848 Hv_44K_v2
GAGAGCACGTTCCAGTCGGCGGCGGCGAAGGAGAGCAAAGGCGCCGGCGAGGCGGGGAGC
AAGAGGTCCGCCGGAGGAGGAGGGGGGCTGTACGTGAAGGTGAGCATGGACGGGGCGCCG
TACCTTCGGAAGGTGGACCTGAGGACGTACGGCGGGTACCGGGAGCTGCGCGCGGCGCTG
GACGCGCTCTTCGGCTGCTTCTCCTCCTGCTCCTCCCCGGACAACGCCCCCTTCGCCATG
GCCTACGAGGACAAGGACGGCGACCTCATGCTCGCCGGCGACGTCCCCTGGGACATGTTC
ATCTCGTCCTGCAAGAGGCTGAGGATAATGAAAAGCTCGGAAGCACGATGATGGCGACGA
AAAGGACACGATCGTGCACACATACATAAATGAAGCGATCCGGAGACGATGGAAACTTGC
CGTACGTGGCTCATGATCAGAGACGGACACACAGACGCATGCATGATCGGGCCGGCCATG
GGTGAACGGCGACGGAGGCCGTGACCCGTGAGCTAGCCGGTTCACGCACGCGCGCTCTGT
GAAGTGTACTGATCTGCATCCACCCGCTCGGTACGAACGCGAGGCTGGGTCCAGGGACTC
ACAGGCGCGCGAGCTCCGGCGGCCAGTCCGGCCGGATCGGCGCGCAGGTAGCATGTAGCG
GTAGCAGACTAGCAGTACTGTTTTGTCGGAGTAGTAGGTAGTAGAGTACATGCACGTACT
GATGTTGTACAGCCAGAGGTTCAGGCAGCCATGTAAGAAAGGACCGGGACTTGGGTGTCC
GTGTAGTAGATAAGTTCTCTCTGCTTAGTTTTACAAGTTTCCCTTTTGTAAAAAAAAAAA
AAAAAAAA



Homology of Contig U35_16101 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None