barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16519_PI390587928Hv_44K_v2CCTATGAGTGATCCATTTACTTGTCTCTCTGTTGTATAAGAGGCCTCAAATTAAAATTCA676GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK249068.129652e-241062 - 112110060 / 60plus ABC04958 ABC04961
MLOCMLOC_41051.16492e-24267 - 32610060 / 60plus ABC04958
MLOCMLOC_9632.54227e-23337 - 3969859 / 60plus ABC04958
MLOCMLOC_9632.25177e-23410 - 4699859 / 60plus ABC04958
JLOC1JLOC1_26795.16498e-25267 - 32610060 / 60plus
Harvest21ABC0496025183e-25513 - 57210060 / 60plus
Harvest21ABC393666201e-23331 - 3909859 / 60plus
Harvest35U35_161097613e-25677 - 73610060 / 60plus
Harvest35U35_1610814873e-25650 - 70910060 / 60plus



Contig Sequence (761 bp)

>U35_16109 761 Hv_44K_v2
CACCGAAGGAGCTCAGGAATGGGGAATGGGCGCGAGGCATCGCGGTGGAGGACGATACGG
CGACCGACTTGCTCGCTTGGGCCGAGGCGTCAGGGCGGAGGACGACATGGTGGTCGGCTT
GCTCGCTTCCGAGGATGGAGGCCGCCTCGCCGGGGCTTGGGTGGGGCATCACGGTGTCGG
GCTATTGCCGGTGGTGCCGGGGCCGGGTGGTGGTTTGACGGGCGACGCAGAGGAGGTGTT
GTCCTGGATCTAACAACCACCACAGGGGTGGCCCGGCGGGAGCTGCAGCTCGTCGGCATC
GCGGCCATGCTCATCGCCTGCAAGTACGAGGGGATATGGCGCCCGAGGTAGGCGATTTCA
TATCCATCGCCGATAACTCCTACTCGAGGCAGCAGATCCTGTCCATGGAGAAGAATATCC
TGAACAGCATGGCGTGAAACCTCACGGTGCCCACCCCGTCCCTGGTGCGGTTTGCCAAGG
CCGCTGGGGGCGACAAGGAGCTTCCAAACATGATATTCTTCTTTGCCGAGATGGCTCTCA
TGGAATACGAGCTGGTCACCGTGCGCCCCTCGCTGCTCGCAGCGTCTGCCGTGTACGCTG
CTCGGTGCACGCTGAAAAGAAGCCCCATCTGGACAGAAACCCTTAAGCATCACACCGGAC
TCGCTGAACCACAGCTCCTATGAGTGATCCATTTACTTGTCTCTCTGTTGTATAAGAGGC
CTCAAATTAAAATTCATGATATAGAATATATATAGATACGT



Homology of Contig U35_16109 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None