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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16495_PI390587928Hv_44K_v2CCCTACTTCATTTGAAGCTCTTGAAAGTGTGATTAAGGAGACATTTGAGAAGCTGGTTGA962GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK249362.122782e-24996 - 105510060 / 60plus ABC05040 ABC05042
MLOCMLOC_67077.413472e-24363 - 42210060 / 60plus ABC05040 ABC05042
MLOCMLOC_67077.216092e-24372 - 43110060 / 60plus ABC05040 ABC05042
MLOCMLOC_67077.315032e-24369 - 42810060 / 60plus ABC05040 ABC05042
MLOCMLOC_67077.116257e-23394 - 45010057 / 57plus ABC05040 ABC05042
MLOCAK249710.125223e-211251 - 13109758 / 60plus ABC05040 ABC05042
MLOCMLOC_66461.38043e-21304 - 3639758 / 60plus ABC05040 ABC05042
MLOCMLOC_66461.115453e-21307 - 3669758 / 60plus ABC05040 ABC05042
MLOCMLOC_66461.215723e-21306 - 3659758 / 60plus ABC05040 ABC05042
JLOC1JLOC1_44244.118488e-25483 - 54210060 / 60plus
JLOC1JLOC1_43794.118282e-21445 - 5049758 / 60plus
Harvest21ABC0503910373e-25978 - 103710060 / 60plus
Harvest21ABC0504223556e-221070 - 11299758 / 60plusABC05042
Harvest35U35_1611610223e-25963 - 102210060 / 60plus
Harvest35U35_1611522546e-22970 - 10299758 / 60plus



Contig Sequence (1022 bp)

>U35_16116 1022 Hv_44K_v2
AATCTCCGTCCCAGAGCAATTCGGCCTCCACTTCGCCTTGCCTCGCCTCGAAAGGGGAAG
TAAATCATGGCGACAGGTCAAATTTTCTCAAAAACCACCCAAGCATTATTCTATAATTAT
AAGCAACTCCCCATCCAAAGGATGCTTGATTTTGACTTCCTCTGTGGGAGAGAAACACCT
TCTGTTGCTGGAATAATCAATCCTGGTTCTGATGGGTTCCAGAAACTTTTCTTTGGACAA
GAAGAAATTGCTATTCCAGTTCATCCTACAATTGAAGCTGCTTGCAATGCACACCCAACT
GCGGATGTATTTATCAACTTTGCATCTTTCCGGAGTGCGGCTGCTTCTTCAATGTCAGCT
TTGAAGCAGCCGACTATCCGAGTTGTAGCCATTATAGCAGAGGGAGTTCCTGAATCAGAC
GCAAAGCAGCTAATTAGCTATGCACGTGCCAACAACAAGGTCATCATTGGACCTGCAACA
GTCGGAGGAGTTCAGGCTGGTGCTTTCAAGATTGGTGATACGGCTGGAACCATTGATAAC
ATCATTCAATGCAAGCTGTACAGGCCTGGATCAGTTGGTTTTGTGTCTAAATCGGGTGGC
ATGTCAAATGAGCTGTACAATACCATTGCAAGAGTGACCGATGGTATTTATGAAGGAATT
GCAATTGGTGGGGACGTTTTCCCTGGCTCAACTCTTTCAGATCACATTCTGCGTTTTAAT
AACATACCCCAGGTTAAAATGGTGGTTGTTCTTGGGGAGCTTGGAGGAAGCGATGAGTAT
TCACTCGTCGAAGCCTTGAAACAAGGAAAGGTTCAGAAGCCTGTTGTTGCTTGGGTTAGT
GGGACATGTGCACGCTTATTCAAATCTGAGGTCCAGTTTGGCCATGCTGGTGCAAAGAGC
GGTGGTGAGTTGGAATCTGCACAAGCTAAGAATCAGGCACTAAGGGATGCTGGGGCAGTA
GTCCCTACTTCATTTGAAGCTCTTGAAAGTGTGATTAAGGAGACATTTGAGAAGCTGGTT
GA



Homology of Contig U35_16116 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os01g19450.16090.0protein|ATP-citrate synthase subunit 1, putative, expressed
Brachypodium v1_2Bradi2g11480.16090.0
Arabidopsis v10AT5G49460.16080.0| Symbols: ACLB-2 | ATP citrate lyase subunit B 2 | chr5:20055048-20058195 FORWARD LENGTH=608