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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16421_PI390587928Hv_44K_v2TGTCAGTGAGGCCACCTTATGGAACAACGACCAATAATGTGAGAGTATTTTTCTAAAAAA794GeneList: orange
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.4951.0941.4021.6800.7450.923
Raw 2.56416.60719.86835.1944.3967.496



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC207098653e-25795 - 85410060 / 60plusABC20709
Harvest35U35_102198653e-25795 - 85410060 / 60plus



Contig Sequence (865 bp)

>U35_10219 865 Hv_44K_v2
AACTTTGCAGCGAGTGGCCATGGCTCATCGTCTCCCTCTTCTCTGAGCTCGCAGCCGCCG
CCGCCTCCTCCTCGCCGTCGTGCTCTCCCAGCTCGGCGCGCTCTCGTGCCAGACCCTCCG
CGGCTCCGTCACATGCCTCGACTGCCCCGCGGGCCACCGTCCCTCCGGTACGTACGTTCG
TACGTGCGTGCGTGCACCAAAAGAATCAAACGCGCGCTCGCGTGACACGAGCCGTCTGAT
CGCGCTGACACTTTTGCGGGTACGTACATCTATCTGCCAGGTGTGGTCGTGGCGGTGGAG
TGCAGCGGCGTCGACGGCGGCAGCACGCGCCCGCGCGCTGTGGCGCAGACGGACGGCGGC
GGCAACTTCGGCGTGGCCGTGCCGGAGCCGGTGCCGGCCTCGCGGTGCGCCGCGAGGGTC
CTCGGCGACACGCGGGAGCAGCTCTGCGCGCCGCGGAGGCTCACCGTCGCGCGTGTCGTC
GTTGCCGGGTGGGCTGGCTCGTACGCGCTGGGATCCCGACTCGCCGTCTTCACGAGGTGC
GGAGGAACCGTCGCGACCATGTCCGCCGGCGGCAGCGACCAGAGGTCACCCCCGAGGCTT
GCATCACGGCCCAGCCTGCCGCCGCGCTTTGGACGGAGCAGCCCACCCCTACGGCCTGGG
CATCCCTCTCATCTACGTCTTCCCTTTCATCCCAATCATTGGCATCCCCTAAAATGAACG
TACCCGCCGTATGCGGCCCTGAGTATTTTTGTTACCTTCTTTCGGCCAAGTTTGCAGTAA
TCTGTAGCCATCCATGTCAGTGAGGCCACCTTATGGAACAACGACCAATAATGTGAGAGT
ATTTTTCTAAAAAAAAAAAAAAAAA



Homology of Contig U35_10219 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None