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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16418_PI390587928Hv_44K_v2CTCCCCTTTGTTTAGGGTCCAATTTGTATCTGTGGGTACATTTGTTTTGTTAATATAGAA798GeneList: plum1
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0780.1870.7791.9452.0662.507
Raw 2.80418.43570.197251.505104.371136.159



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_40276.18678e-25796 - 85510060 / 60plus
Harvest35U35_102228953e-25799 - 85810060 / 60plus



Contig Sequence (895 bp)

>U35_10222 895 Hv_44K_v2
GTGATCACCATGTCTAGAGATACCGTGCTGATATGCGTTTCCGTGGCCGGGCTGGTCGTG
CTCTCCGTCCTCACCTTCTTTTGCTCCAGCCGGCGGCGTAGAGGCCACGGCTCCTCATCG
TCGTCGTCACACCCGAGGGTCGTCGACGTCGAGCTCGGCTGCCGGTGCGCCACCGCGGGG
ATCGACGAGGCCGTCCTGACCGCGTACCCGACGATGCTATACTCCTCGCCGGCACGTGCA
GACGACGACGATGTTCTTCAGCCTGCCGCCGCGCCTTCGACCGGCGACAGCGATCCAGCG
CTGGACGACACGACGTGCGTGGTGTGCCTAGCGGAGTACGCGGACGGCGACGAGCTCCGG
CGGCTGCCGGGGTGCCGGCACGCGTTCCACCGACAGTGCGTCGACGAGTGGCTGCGCCAG
CGGCCCAGCTGCCCGCTCTGCCGCACATCGCCGCAGTCCACCGCGGCGAAGAATTCCTGT
ACCGCCGGCCATGGCGTCAGTGTGCAGCCAAGGGATGAAGAGAGCTAGCAGAGTAGTACT
CCTACATACCTTTTTTTTTTAATTTAGTAGGAGTACTACATAGGTACCTACTACTCCCTC
CGTTCCTAAATACAAGTCTTTAAAGAGATTTCATTAGTAGACTACATACGGATGTATATA
GACATTTTTTAGAGTGTAGGTTCACTCATTTTACTTCGTATGTAGACTCTTAGTGAAATA
TTTTAAAAGACTTATATTTAGGAACGGCGGGAGTACATCGTTGTGGCCATGTTACCGTTC
ATGTCTCACTGTTGTAATCTCCCCTTTGTTTAGGGTCCAATTTGTATCTGTGGGTACATT
TGTTTTGTTAATATAGAAAAAAAGAGGGTTTAAAAACTAAAAAAAAAAAAAAAAA



Homology of Contig U35_10222 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None