barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16347_PI390587928Hv_44K_v2GAGCAGCCCTTTTAGACTGTCAATTAAGCATTAAGCATCCTATGCATGCTACTTTATTGT665GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_14118.532079e-222944 - 30019858 / 59plus ABC03873 ABC03875 ABC39567 ABC49783
MLOCMLOC_14118.330409e-222733 - 27909858 / 59plus ABC03873 ABC03875 ABC39567 ABC49783
MLOCMLOC_14118.145999e-224292 - 43499858 / 59plus ABC03873 ABC03875 ABC39567 ABC49783
JLOC1JLOC1_9622.138235e-223530 - 35879858 / 59plus
Harvest21ABC038757313e-257 - 6610060 / 60minusABC03875
Harvest21ABC0387331622e-223006 - 30639858 / 59plusABC03873
Harvest35U35_156127313e-25666 - 72510060 / 60plus
Harvest35U35_1561132812e-223026 - 30839858 / 59plus



Contig Sequence (731 bp)

>U35_15612 731 Hv_44K_v2
AGACAACACCTGCCACAGGAGCTGAAACAAGTGATGCTTTGGGCAACAAGAAGAAGCAGG
ATCGCTCTTCATGTGGTTCCAACACACCATCAAGTAGTGATGTAGAGGCAGAACATGTTC
CTGAGAACCAAGATCAAGCTAACGACAAGACACAGCAAGCATGTTGCAGTAATTCTTCAG
CTGGTGACATGAACCATCGCAGGTTTAGGAACATTTCAAGCACGAATGATTCATGGAAGG
AAGTTTCCGAGGAGGGTCGTATGGCTTTCGATAAACTGTTCAGTAGAGGAAAGCTTCCCC
AAAGCTTTTCTCCTCCACAAGCAGAAGGATTGAAGGTGGTTCCCAGAGGGGAGCAAGATG
AAGCTACTACGGTGACGGTCGACCTCAACAAGAGTGCTGCAGCTTCAAACCTTACAAGAG
GTGCTCGGTGGAAGCAAAGGAGAATAGGGTGCCGGCTGCTGACGAGGTTGGTACCAAAAG
GATTCGCCTTGACAGCGAACCCTCCACGTGATTTACTTCCCACGACATGATTACCAGCCT
GCACAAGTAGTGTATTTTCAAGAAATTGCGGTATTTACATCTAAGCTACTATAGGACTTG
CCAGTCCTTGCAATGCAGTGTTTCACAGAACTCAATTTGTTATGTGTTGTATGTTAATGC
TTGCCGAGCAGCCCTTTTAGACTGTCAATTAAGCATTAAGCATCCTATGCATGCTACTTT
ATTGTAAAAAA



Homology of Contig U35_15612 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os08g06110.27205e-69protein|MYB family transcription factor, putative, expressed
Brachypodium v1_2Bradi3g16515.17163e-70
Arabidopsis v10None