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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_159_PI390587928Hv_44K_v2CGGCATGTTTGTAATACGGAAGTGAGCCATGGTGTAAATAAATAAAAGTGATATAAGACT805GeneList: black
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.1000.0770.5781.8611.5642.819
Raw 4.1773.29743.139215.78665.811129.632



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_60337.110076e-241 - 5910059 / 59minus ABC11450
JLOC1JLOC1_39334.19704e-231 - 5710057 / 57minus
Harvest21ABC114509413e-25806 - 86510060 / 60plusABC11450
Harvest35U35_195959413e-25806 - 86510060 / 60plus



Contig Sequence (941 bp)

>U35_19595 941 Hv_44K_v2
CTAGCTAGTTCGCTTTCTCCCAAAGTATTCCTTTCTTCGCACAGAGAGAAAGAGAGGCCG
AGATGAAGCTCGTGTGGTGCCCGGAGACCGCGTCGCAGGCCTTCATCGCCGGCGTAAGCG
CGCTGTCAGACTCCGAGCACGGCCCCGCGGGGTCGGCGGGCGTCGCCGAGCTCGTCTCCG
CAATGGTCGGGGGATGGAACGCGCAGCTCGTCGTCGAGGCGCCGGAGGTCTCGGCTCCCG
ACTCGGCCACCATGAGCCTCGCCCTCGCCGCCGCCGCCGGGCGAACGGGAGGCCGCTACG
CCCACGTGCTACCGGACAAGGACGCGGACGGGGCCATGGCGGAGCTGGAGGGCGTGGACT
TCTTGGTGGTCGACGCGCGGAGGCGGGACGCGGCGGCCGTGCTGGCGGCGGCCAGGCCTG
GGCCGAGAGGGATGGTGGTGGTGCGCCACGGCGACGGGAGGCGGCCTGGCACGAAGGCGC
TCGAAGCGTCCATGGCGGCAGGGACGAGGGTAGTGCGGTCCGTGTACCTGCCGGTCGACA
AGGGCGTCGAGGTCCTCCACGTTGGCGTGGGCAAGGGGCCGAGCCTACAGTTCCGGCGCC
ACCGGAGCGCGTCGAGCCGTTGGATCCGGCACGTCGACCACAAAACCGGCGAGGAGCACC
TCTTCCGCCGGCCATAAATTCAACCGCTAGCTTTCATGTACATCAACCGGTTCTAGTCTT
GTAGACTTGTACTAATACCGTACCGTCCAAGGGAATTAGCTAGGTGGCCATGGTCATGCA
TGGTGTCCAGATTCTTTGAATCTGCCGGCATGTTTGTAATACGGAAGTGAGCCATGGTGT
AAATAAATAAAAGTGATATAAGACTTAAATGTTTAATACTTATCTCACATCTACATGTAT
TTTAATAAAATTATAAATTAAAATAAAAAAAAAAAAAAAAA



Homology of Contig U35_19595 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g25780.12654e-68protein|expressed protein
Brachypodium v1_2None
Arabidopsis v10None