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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15930_PI390587928Hv_44K_v2CTTGAGGGTATTGCTTCTTCTGTAAAGTTCCCAATACAAAAGATGATATTCATCAGTCAA961GeneList: green
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1301.1421.1701.2550.5750.476
Raw 686.5451103.164981.7581660.630264.418237.833



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_57797.130716e-242833 - 289110059 / 59plus ABC12609
MLOCMLOC_57797.216676e-241457 - 151510059 / 59plus ABC12609
JLOC1JLOC1_37518.117553e-241451 - 150910059 / 59plus
Harvest35U35_478510363e-25962 - 102110060 / 60plus



Contig Sequence (1036 bp)

>U35_4785 1036 Hv_44K_v2
CCTTGCCCCGCCCACAGATTCGCCCCCCTTCTCCTCCTCCCCTCGCGCCGCCCGGCGGTT
CTTGATCCGGTTCCGCTTGCCGTGCTGCCCGTGCTGCTCCGGGCCAAAGGCTGCTGCTTG
GAGGCGGCGGCGGCGGCGGCCTCGATCTGCGCCGGGGCTCAGATTTGATCGGCGTGGCGC
GCTCCTGTGGAGCCCGGGGGTTCCGATCGGCCGCGCTCCCGGTGTGCTGACCCAATTCCC
CGACTTTGATGAGGCTCTCGCACTGTGAGAGCTACTGCGCCGCCCCCCTCTGCTACATCC
CCTGCCTCCCCAAATCCAAAGATGCACCACCACCAGCCGCCGCCGACGCCGACGCCGTCT
CCGCCGCGCCCTGCCCGGTCTCCATCGAGGACAAGCCGCCTCCCGTCCAGAAGTTTGAGC
TTGTGGCGGCGCCGGCCGACAAGGACGACGAGGACCACAAGGAGGACTGCGAGAAGACGA
CGGCCGCGGCGCCGGCGCCTGCGCCACCACCCAAGAGCAACCTCAAGAAGGCCAACTGCG
GCGACGACGTGGTAATTGCCCCCAAAGGCAATGTGAAGTGGCTTGATTTGCTGGGGAAGG
ATCTCACCGAGGTCAAGGAGTTCGAGCCAAGCGAATCCGGAGACTCGATGGACGATGAGG
GCATCTCGACGTGCGTGTGCGTCATCCAATGAACCCAAGGAGGAAGGCTCATGTACATTT
GTGTGAAAATTAAGGGGGGCGCCCAGCATTCGTTGCCTGTACCGGTTTCATCAGTACATG
CCGCCATAGCTGCTTAGTAGATGTAGTAGAGGGGGGGTGGGGGTTTTCTGCTGTTTTTAT
CAATCAGTCTCAGATCGGTCGAGTTCTTCGGTGTGGGGTGGAGCTTTGTCTGCGGGAGTC
GATACAGTACGCGTTTCGACGCTCCTGTCGGGTCGGCTGGTGTTGTAGTTCAGAGTTGAG
ACTTGAGGGTATTGCTTCTTCTGTAAAGTTCCCAATACAAAAGATGATATTCATCAGTCA
AAAAAAAAAAAAAAAA



Homology of Contig U35_4785 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None