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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15923_PI390587928Hv_44K_v2ATTGTTCAATGTATTGTTCTGAATCGTTTGTTTCCCGGTAAATGTATGTGGTCCATAGGG1057GeneList: royalblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.7512.8320.8260.4080.9300.828
Raw 20.64533.9917.9894.5323.5633.366



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC153967113e-254 - 6310060 / 60minusABC15396
Harvest35U35_479211203e-251058 - 111710060 / 60plus



Contig Sequence (1120 bp)

>U35_4792 1120 Hv_44K_v2
ATTTAACAACCGTACCGTGGCCACTTGCATGCGGCGCACGTCAAGGGCATATGCTGCTTG
TGTCTTGTGCGTGTATGTGTGTATTCTGTCACAAGCTGAGTGCACATGGAGACGTCACAG
AATTAAAGGGAAAAGGAGGATGTTTCGGGGGCAAACCAGAGTTAACCTTACAAGTCATCA
GTCAAAATTTATACTCCCTCCGTTTTTAAATATAAGACCTTTTAGATATTGCACTATGAA
CTACACACATATGTACATAGACATATTTTAGAATGTAGATTCATTCATTTTACTCCATAT
GTAGTCTCCTAGTGTAATATCTAAAATGTCTTATATTTTGAAACGGAGCGGGTAGCAATT
GACTAGCGGCATGTGAATTAACCTGACTTGATGGTGTGGTTTGGTCCGCAGAACGAGGTG
TCCGTGCTGTCTCCTCGGGTGGCCTTCCTGGATCAGCAGCGGACGATCCTCACCGTCGGC
AACAGCCACCTCAAGCAGCGGATCGCGGCTCTGGCGCAGGACAAGCTTTTCAAGGACGCT
CATCAGGAGGCGCTCAAGGAAGAGATCGAGAGGCTGCGGCAGGTGTACCAGCAGCAGAAC
CTCAGGATGTCGTCGGGCGCGGGCGCGGCCTCCGACCACGGCGGGCCGCCACCTGTGCGC
GCGGAGAAGGAGCTCATGAGCTAGCCGAGCGATCATGGCATGCCCCTTCCGCCACGCCGC
CGCAGCATCATTGACCTGTGAGCGGGAGGGAAACATGGCATCAATGCATGAATGAAACCG
TCCATGCCGTTTTCTTTTTCTCGTTCTTGTTATTGTTCTTCTTTTTTTCCATTGACCTGT
ATCATTTTTTGCATATCGATTTCGTTTTTTTACTGTGAAGGAAAAAAGAAACAAAGTGTA
GCTTCGTTGTAAATTCTGTGTGTAGCATTGCATCCTGTGTACGTAGACTGTTTTCGGTTT
AGTTTTGGAGCCGTTGTTTTTTAGGAAAGTTTTTTTTTGTTTTGGAAACCACATAAGCAT
AACTCTTGCTTTCTATCCTCGTACTGATTTTAGCAGAATTGTTCAATGTATTGTTCTGAA
TCGTTTGTTTCCCGGTAAATGTATGTGGTCCATAGGGCTT



Homology of Contig U35_4792 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None