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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15868_PI390587928Hv_44K_v2GTCCCCTTGTAGACTGGTTTGTTATTGGAGGCTTGGAGATTTTTCGATCCTAAAAACAAA40GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5251.7231.2480.8080.3650.642
Raw 100.865181.320110.094112.35919.32734.210



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_65360.328917e-232822 - 28829860 / 61plus ABC44769
MLOCMLOC_65360.619347e-231872 - 19329860 / 61plus ABC44769
MLOCMLOC_65360.716357e-231573 - 16339860 / 61plus ABC44769
MLOCMLOC_65360.816637e-231562 - 16229860 / 61plus ABC44769
MLOCMLOC_65360.914587e-231357 - 14179860 / 61plus ABC44769
MLOCMLOC_65360.230157e-232930 - 29909860 / 61plus ABC44769
Harvest21ABC447696683e-2541 - 10010060 / 60minusABC44769
Harvest35U35_456466683e-2541 - 10010060 / 60minus



Contig Sequence (668 bp)

>U35_45646 668 Hv_44K_v2
TTTTTTTTTTTTTTTTTGACAACAAAAAACTGTTATTTTTTTTGTTTTTAGGATCGAAAA
ATCTCCAAGCCTCCAATAACAAACCAGTCTACAAGGGGACCAAATTTTCTTGTCACAAAA
TAAAATGGTGCGCCGGGCCAAACTGCTGACCCTGTGAAACAAGAAATATCAGATTTACAA
GGTTCCCAGAGCGAACGAGAATCGCCTCCGGCCACCCCTCCGAGGATGCCACACCTTGAC
CTCCGGTCTCCCTCACGTCACCATTCCTTGCCACCCGGTGCTTCTTCCGTCGACGTTGCA
CTCCACTGGCCAAAAGTGAGCCCAACGCACCCAACGTGTTCAGCAAAAGTGAGCCCAAGG
CACCCAATGTGTTCATCGAATTGCCACAAAGTTGATTTATTTTTTTATTCTGCTTCTTTT
GGTCAGCTCGAAAAGCAGGAAATTTTATGGAGACCAAAAACCTTCTCTCTTCACACCTAA
AATTTGGTCTTCAACTTTTTTGGTCAACTGTTGGAGATGCTCCAGGGAGAGACTACCCAC
ACCCATTCCATTGTGACTTGAACATTGCAGTAATAAAAATGTTCAGAGATTCACCAGCTT
GTACATAGTCATCAGTACCTAAGAGTTCAGAAGCTAGAACACACTTAAAATGCTGCAACT
GGAAAAAG



Homology of Contig U35_45646 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None