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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15747_PI390587928Hv_44K_v2TTATTCTATTATGTAAGATTGCCCTTTGTGTCACTACATTTTACAATCAAGCGATCAGCC762GeneList: midnightblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2650.2630.4252.4242.4163.607
Raw 3.2285.42711.525105.84135.25958.171



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC257218433e-2522 - 8110060 / 60minusABC25721
Harvest35U35_257618433e-25763 - 82210060 / 60plus



Contig Sequence (843 bp)

>U35_25761 843 Hv_44K_v2
GGGCGGCGAGGCCCTTGGCCCCTGCGTGTCTCCATCCGCTCATGGTGTGGCGGCCAGCGG
GGACGGCGGCGGCCCGACCTTTTCCACGGCGAAGCAGGCAAGGCCCTCCCGGACAACAAC
AGAGCGGTCCTCAGATCGCATGGAGGTGGCCCACGAGACGCAACGCGCGGCAACAAGGAC
GCCCTCGTGCTTCCATTTACCATGCGACTGCCAATGGCAACAACGGCAAAGGGAGGATAA
GGTCTCACCATAGCCCTCGGCCTCTAGGACGGAGCCGCACAGGACTAGGACGCGGCTACA
CACCGTCACACACGAACGTTGAGCAGCTGTAGCGACGACGCCGTCAGGCGCGGGCGCGCG
GCGCAGAAGCCGGCGGTCTGCAGCACCCTCTGGCGTGCAGCGCAACCGGGCGCCATCCGA
GGCCATCCATGGTCAAGATGATACACAACACAGCAGCGACGCCCTCCGGCGCAGATCGCT
ACAGTCGGACTTCCATCGCTGCTCCTCCTGGCGCCACTTCCTGCAGAATGGCGTAGGCGC
GGCCCTCGGCCGACCACACAGTGTCTAGCCTACGCGGAAGCAGCCTATGAGGCACAAGGC
GAGGAGAAGGCAACGTCGCAGGGCCAGCGCACGACACGAGCGCGTCACGGCCGGCGCATC
CTAATCAAGCAACAGCGGTGGCAATTTGCATTGGCTACCACACACAGGATAAGGATTGGG
AAAATCTTATCTTCTATACATGTTGCATTTCAGCCCTTAGGTTTATTCTATTATGTAAGA
TTGCCCTTTGTGTCACTACATTTTACAATCAAGCGATCAGCCATTTAAAAAAAAAAAAAA
AAA



Homology of Contig U35_25761 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None