- Probe CUST_1564_PI390587928
- Source Contig U35_42206
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_1564_PI390587928 | Hv_44K_v2 | GCTCTTATAAATTTTCATGTTGCTTTGGAAATGTATCGAAGCCGAAGATATATTGTGGTG | 280 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_21918.2 | 663 | 2e-24 | 565 - 624 | 100 | 60 / 60 | plus | ABC10354 ABC37717 |
| MLOC | MLOC_21918.1 | 809 | 2e-24 | 711 - 770 | 100 | 60 / 60 | plus | ABC10354 ABC37717 |
| MLOC | MLOC_21917.4 | 727 | 2e-24 | 629 - 688 | 100 | 60 / 60 | plus | ABC10354 ABC37717 |
| MLOC | MLOC_21917.5 | 1218 | 2e-24 | 1120 - 1179 | 100 | 60 / 60 | plus | ABC10354 ABC37717 |
| MLOC | MLOC_21917.3 | 543 | 2e-23 | 486 - 543 | 100 | 58 / 58 | plus | ABC10354 ABC37717 |
| JLOC1 | JLOC1_15199.7 | 814 | 8e-25 | 696 - 755 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15199.6 | 674 | 8e-25 | 556 - 615 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15199.5 | 1502 | 8e-25 | 1384 - 1443 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15199.4 | 1237 | 8e-25 | 1119 - 1178 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15199.3 | 604 | 8e-25 | 486 - 545 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15199.2 | 747 | 8e-25 | 629 - 688 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15199.1 | 509 | 8e-25 | 391 - 450 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC37717 | 359 | 3e-25 | 281 - 340 | 100 | 60 / 60 | plus | ABC37717 |
| Harvest35 | U35_42206 | 359 | 3e-25 | 281 - 340 | 100 | 60 / 60 | plus |
Contig Sequence (359 bp)
>U35_42206 359 Hv_44K_v2 TGTTGCTGCTGTTGCTGGGCGCGCGCAGGTCATGCGTGATTCAAGGCTCACGGGGAGAGA TGACAAGCGACAATTAGACATGAACCGAGAAGTCTTTCCTCAAGCAGCAAAAGGTTTTTG CTCAGGACTGACGAGGCTTGTGTGGAGTTTCTGGATTGATGACAAGGCTGGTGTCTCGGC CTGATTCTTTGTTGTAGAATAGTTTTGCTTGGCACTTGCTGGTTCTTGCAATGTAAAGAT CTGCACTCTTGGAATGAATGGTTGTAATGTTATATTTTGGGCTCTTATAAATTTTCATGT TGCTTTGGAAATGTATCGAAGCCGAAGATATATTGTGGTGTGAAAAAAAAAAAAAAAAA
Homology of Contig U35_42206 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |