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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_1560_PI390587928Hv_44K_v2AATGAATGTCCTTGAAGGTTCAAAGGATGCAAGGGCTGTGGAGTCTGAGAGTGGAAAAAA276GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_19017.210909e-22501 - 55510055 / 55plus ABC19681 ABC30043
MLOCMLOC_19017.124989e-221514 - 156810055 / 55plus ABC19681 ABC30043
JLOC1JLOC1_13174.25695e-22198 - 25210055 / 55plus
JLOC1JLOC1_13174.117285e-22637 - 69110055 / 55plus
Harvest21ABC300433513e-25277 - 33610060 / 60plusABC30043
Harvest35U35_302303513e-25277 - 33610060 / 60plus



Contig Sequence (351 bp)

>U35_30230 351 Hv_44K_v2
TTCAGATAGTGGCAGCATTGGGGGGCATGATGATGAAGAAGATCTTCTGTCTGAGAAATC
AAATGATGCATCGGAGAACGAAGGTGATGATGAGGACGATGGGATGCCTGTTGGTTCTGA
TGAAGATGAGGGTGTTGAGGTTAGACAAAAGGTTGTGCAGGTTGATCCCAAGGAGCAAGA
AGACTTTGACCGAGAGCTGAAAGCCCTTCTACAGGAGAGTTTGGAGTCACGTAAATCGGA
GGTGCGTTCCAGGTCCAGTTTGAACATGAAGGTACCAATGAATGTCCTTGAAGGTTCAAA
GGATGCAAGGGCTGTGGAGTCTGAGAGTGGAAAAAAAAAAAAAAAGGGCGG



Homology of Contig U35_30230 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None