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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_15584_PI390587928Hv_44K_v2ATGCATGGTTGATGCCACATTGGTTCAAGTATACAGAAAGAAAATAATACCGCTTGGAAA1205GeneList: lightgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.5690.5550.6321.8453.2628.040
Raw 15.64724.00223.730117.06666.120181.490



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_19456.2226159e-222269 - 23269857 / 58plus ABC44086
MLOCMLOC_19456.1433869e-223201 - 32589857 / 58plus ABC44086
MLOCMLOC_19456.1535249e-223339 - 33969857 / 58plus ABC44086
MLOCMLOC_19456.1632999e-223114 - 31719857 / 58plus ABC44086
MLOCMLOC_19456.1734179e-223232 - 32899857 / 58plus ABC44086
MLOCMLOC_19456.1929679e-222774 - 28319857 / 58plus ABC44086
MLOCMLOC_19456.2033099e-223117 - 31749857 / 58plus ABC44086
MLOCMLOC_19456.2131759e-222983 - 30409857 / 58plus ABC44086
MLOCMLOC_19456.1037579e-223565 - 36229857 / 58plus ABC44086
MLOCMLOC_19456.1830889e-222895 - 29529857 / 58plus ABC44086
MLOCMLOC_19456.1138869e-223695 - 37529857 / 58plus ABC44086
MLOCMLOC_19456.1240149e-223823 - 38809857 / 58plus ABC44086
MLOCMLOC_19456.241149e-223921 - 39789857 / 58plus ABC44086
JLOC1JLOC1_13486.729395e-222723 - 27809857 / 58plus
JLOC1JLOC1_13486.629465e-222730 - 27879857 / 58plus
JLOC1JLOC1_13486.524125e-222196 - 22539857 / 58plus
JLOC1JLOC1_13486.423065e-222090 - 21479857 / 58plus
JLOC1JLOC1_13486.330655e-222849 - 29069857 / 58plus
JLOC1JLOC1_13486.232395e-223023 - 30809857 / 58plus
JLOC1JLOC1_13486.133375e-223121 - 31789857 / 58plus
Harvest21ABC440865413e-2515 - 7410060 / 60minusABC44086
Harvest35U35_2249712793e-251206 - 126510060 / 60plus



Contig Sequence (1279 bp)

>U35_22497 1279 Hv_44K_v2
AGTCCAGTAGGCTACAACGGCAACAAGTCTGGCAGGCTACAATGGCCGTGAGGTACTTAC
TGCTCCTGGCCATCTTCCTCCTTCCGACTCAACCAACGACACATGCCGGCAAGAAACAGC
CGGCGGTGCCAGCGGTGATGGTGTTTGGTGACTCACTGGTCGATGTAGGCAACAACAACT
ACATCTTCACCATCGCCAAAGCCAACTTCCCTCCCTATGGCAGAGACTTCAAAGACCATG
TCGCCACAGGGAGGTTCTGCAACGGCAAGCTGCTTATCGATTTCATAGCTGAAAAGGTTG
GGTTCAATAGCTCTCCCCCGGCGTATCTCAGCCCGCAAGCATCGGGATGGAACCTTCTGC
TTGGAGCCAACTTTGCATCTGCCACATCTGGCTACAATGACCACGGGACTCTGGTTGTAA
GTATCATCGATGAGTGTCCTCTCTTGCAAATTTAAGCATGACTGACCAGTGGACTCCAGA
GATATACTAATGGCCTACTGCAGAATGCCATCTCTTTCTCTCAACAGTTGAAGTACTTCG
AAGAGTACCAAGGTAAGCTGGCAGTGGTGGCTGGGGGCAGCCATGCTCACTCCATCATCT
CGGGCTCACTCTACATCATCTCCGCCGGTTCATGTGACTTTGTCTTCACCTATTACATCA
ACCCTTTCCTCTACATGACCCAAAGCGCCGAACAGTTCTCGGACCGCCTTATCGGCATCT
TCAACAACAGTGTGACGCAACTTTATGGTATGGGAGCCCGACGCATCGGCGTGTTTTCCC
TGCCACCCTTTGGTTGTTTTCCCGTGGCGATCACGTTGTATGGTCATGGGAGGAATGAGT
GTGTGTTGAGGCTCAACAACGACATCCAATATCACAACATGAAGTTGAGAGCTACCGTTG
ACTCATTACGAAAGAAGTACCATGATCTCAAGATTGTGGTTCTTGACATATATACACCTT
TGTACAACCTCGCTACCTCTCCTGTATCACAAGGGTTCACCGAGGCGAAGCGGGCTTGCT
GCGGCACGGGGACGGTGGAGGCGTCAATCCTTTGCAACCCTTTGGTACCTGGGACTTGTC
CGAACGCACGGACATATGTTTTTTGGGATGTTTGGCATCCGTCAAAGGCAGCAAACAAAG
TTATTGTGGACTTTTTTCTGGATGACATCGACATTCTGGTTGCATAAACCCCCCAGATTG
TAGACATGCATGGTTGATGCCACATTGGTTCAAGTATACAGAAAGAAAATAATACCGCTT
GGAAAAAAAAAAAAAAAAA



Homology of Contig U35_22497 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os06g05550.13522e-149protein|GDSL-like lipase/acylhydrolase, putative, expressed
Brachypodium v1_2Bradi1g50970.13537e-144
Arabidopsis v10AT3G16370.13532e-113GDSL-like Lipase/Acylhydrolase superfamily protein | chr3:5556928-5558351 FORWARD LENGTH=353